Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   FSA31_RS00210 Genome accession   NZ_CP044492
Coordinates   29702..30457 (+) Length   251 a.a.
NCBI ID   WP_002284527.1    Uniprot ID   -
Organism   Streptococcus mutans strain T8     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 24702..35457
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA31_RS00190 (FSA31_0039) mreD 25438..25944 (+) 507 WP_002263141.1 rod shape-determining protein MreD -
  FSA31_RS00195 (FSA31_0040) - 26054..27355 (+) 1302 WP_002284528.1 CHAP domain-containing protein -
  FSA31_RS00200 (FSA31_0041) - 27480..28448 (+) 969 WP_002263139.1 ribose-phosphate diphosphokinase -
  FSA31_RS00205 (FSA31_0042) - 28537..29712 (+) 1176 WP_002264118.1 pyridoxal phosphate-dependent aminotransferase -
  FSA31_RS00210 (FSA31_0043) recO 29702..30457 (+) 756 WP_002284527.1 DNA repair protein RecO Machinery gene
  FSA31_RS00215 (FSA31_0044) plsX 30665..31663 (+) 999 WP_002267554.1 phosphate acyltransferase PlsX -
  FSA31_RS00220 (FSA31_0045) - 31665..31913 (+) 249 WP_002263135.1 acyl carrier protein -
  FSA31_RS00225 (FSA31_0046) comA 32141..32722 (+) 582 WP_002276191.1 ATP-binding cassette domain-containing protein Regulator
  FSA31_RS00230 (FSA31_0047) purC 32844..33551 (+) 708 WP_002274471.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29367.90 Da        Isoelectric Point: 6.6577

>NTDB_id=342745 FSA31_RS00210 WP_002284527.1 29702..30457(+) (recO) [Streptococcus mutans strain T8]
MQTKETRGLVLYNRLFREDDKLVKIFTETSGKHMFFVRHATNSKLSSIIQPLILANFILKINNHGLSYIEDYKGVSLFKE
INADIYKLAYATYLVSLADAAISDAVYDAPLFAFLIKTLELMDEGLDYEILTNIFEIQILDRFGVQLNFHDCVFCHRVGL
AFDFSHRYSGLLCPEHYEKDPYRSHLDPNVPYLLNQFQTLHFDSLKTISVKPDMKQKLRKFIDEVYEDYIGLRLKSKKFI
DDLDHWGQVMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=342745 FSA31_RS00210 WP_002284527.1 29702..30457(+) (recO) [Streptococcus mutans strain T8]
ATGCAGACTAAAGAAACAAGAGGTTTAGTGCTTTATAATCGGCTATTTAGAGAGGATGATAAGCTGGTTAAAATTTTTAC
GGAAACTTCCGGCAAACACATGTTTTTTGTGCGTCATGCTACTAATTCAAAATTGTCTTCTATCATTCAACCATTGATTC
TAGCTAATTTTATTTTAAAAATTAATAATCATGGACTTTCTTATATTGAAGATTATAAGGGAGTCTCTCTTTTTAAGGAA
ATTAATGCAGATATTTATAAATTAGCTTATGCTACTTACCTTGTGTCTTTGGCTGATGCTGCTATTTCAGATGCTGTCTA
TGATGCCCCTCTTTTTGCTTTTTTAATTAAGACCCTAGAATTGATGGATGAAGGTCTCGATTATGAAATTTTGACCAATA
TTTTTGAAATTCAAATTCTAGATCGCTTTGGCGTTCAACTTAATTTTCATGACTGTGTTTTTTGCCATCGTGTCGGTTTA
GCTTTTGATTTTTCACATCGCTATTCAGGTCTTTTGTGTCCTGAACATTATGAAAAAGATCCTTATCGTAGTCACTTAGA
TCCTAATGTCCCTTACCTTTTGAACCAATTTCAAACTTTACATTTTGATAGCTTAAAGACCATTTCAGTTAAACCTGACA
TGAAACAAAAGCTGAGAAAATTTATTGATGAAGTTTATGAGGACTATATTGGCCTTCGTCTCAAAAGTAAAAAATTTATT
GATGATTTAGATCACTGGGGACAAGTTATGAAATAA

Domains

Predicted by InterProScan.

Recombination protein O N terminal (RecO_N)

(1-77)

Recombination protein O C terminal (RecO_C)

(84-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

64.94

100

0.649