Detailed information NTG0342661

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: F7V86_RS09395
• Genome accession: NZ_CP044444
• Coordinates: 1817663..1818796 (+)
• Length: 377 a.a.
• NCBI ID: WP_025649976.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain KC41
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1812663..1823796

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F7V86_RS09365	-	1812904..1813350 (+)	447	WP_017419242.1	NUDIX hydrolase	-
F7V86_RS09370	-	1813408..1815129 (+)	1722	WP_014304370.1	pyruvate oxidase	-
F7V86_RS21580	-	1815634..1815897 (+)	264	Protein_1786	peptidoglycan-binding protein	-
F7V86_RS09380	-	1815933..1816490 (-)	558	WP_025649978.1	hypothetical protein	-
F7V86_RS09385	-	1816554..1817003 (-)	450	WP_025649977.1	hypothetical protein	-
F7V86_RS09395	rapC	1817663..1818796 (+)	1134	WP_025649976.1	Rap family tetratricopeptide repeat protein	Regulator
F7V86_RS21400	-	1818793..1818927 (+)	135	WP_254926347.1	hypothetical protein	-
F7V86_RS21210	-	1819311..1819541 (-)	231	WP_017419240.1	hypothetical protein	-
F7V86_RS09410	-	1819922..1820479 (-)	558	WP_017419238.1	hypothetical protein	-
F7V86_RS09415	-	1820576..1820860 (-)	285	WP_014720743.1	hypothetical protein	-
F7V86_RS09420	-	1821376..1821642 (-)	267	WP_014416946.1	hypothetical protein	-
F7V86_RS09425	-	1821748..1823025 (-)	1278	WP_088056325.1	Nramp family divalent metal transporter	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 44765.12 Da
• Isoelectric Point: 5.1066

>NTDB_id=342661 F7V86_RS09395 WP_025649976.1 1817663..1818796(+) (rapC) [Bacillus amyloliquefaciens strain KC41]
MDQVLPSSQVGVKINEWYKMIRQFSVPDAEILKAEVEQEIEEMEEDQDLLVFYSLMCFRHQLMLDSLEPEDRYRDRPTVD
ELLEKIEKPQKRLTGLLKYYSLFFRGMYEFDHKEYVEAIGYYRKAERELNAVLDEMEQAEFHYKIADAYYQIDQHFVSLN
HLKKAKQLFEKNQLYKVKVIGCNMMVGANMYDMYRLTEAESYYREALSIARGLDEEKVKRIIGVIFHNLGLVYLRGENLI
AAEENFKKAIDVKEHIDTVYGVRSLYMMANVLYQCDKAKEARFFYETALNRARTSNEEEYLAKLKIINSLYEEYNETAVK
QSLGYLEEKRLWSDFAELTEQLGDFHFEKRNYAEGRNFLKKTIHAQTQILKVTEAIS

Nucleotide

• Length: 1134 bp

>NTDB_id=342661 F7V86_RS09395 WP_025649976.1 1817663..1818796(+) (rapC) [Bacillus amyloliquefaciens strain KC41]
ATGGATCAAGTTTTACCGTCGTCCCAAGTTGGTGTCAAGATCAATGAATGGTACAAAATGATTCGCCAGTTCAGTGTGCC
TGATGCTGAGATTTTAAAGGCTGAGGTCGAACAGGAAATAGAGGAGATGGAAGAGGATCAGGATTTGCTAGTTTTTTATT
CATTGATGTGCTTTCGTCACCAATTGATGTTAGATTCCTTGGAGCCGGAAGACAGATATAGAGATCGCCCTACAGTCGAC
GAACTGCTTGAAAAAATAGAAAAGCCGCAAAAAAGACTTACAGGCCTCTTGAAGTATTACTCATTATTTTTTCGTGGAAT
GTATGAATTTGATCATAAAGAGTATGTTGAAGCGATAGGCTATTATCGCAAAGCAGAGAGAGAGTTGAATGCTGTATTAG
ATGAAATGGAGCAAGCTGAATTTCATTACAAAATAGCTGATGCCTATTATCAAATTGATCAGCACTTTGTTTCCCTCAAT
CATTTGAAAAAAGCCAAGCAATTGTTTGAAAAAAATCAATTATACAAAGTGAAAGTGATTGGCTGTAATATGATGGTCGG
TGCTAACATGTACGATATGTACAGGCTGACGGAGGCAGAATCATATTATCGGGAAGCATTAAGTATCGCCCGTGGGTTGG
ATGAGGAAAAAGTGAAAAGGATTATCGGAGTGATCTTTCATAACTTAGGCTTAGTTTATTTAAGAGGGGAAAATTTGATT
GCTGCTGAAGAGAATTTCAAAAAGGCAATAGACGTGAAAGAACATATTGATACAGTGTATGGTGTGAGATCATTATATAT
GATGGCAAATGTCCTGTACCAATGTGATAAAGCCAAGGAAGCACGTTTCTTTTATGAAACGGCTTTAAATCGTGCTCGGA
CTTCTAATGAAGAAGAATATTTGGCGAAATTAAAAATCATTAATTCATTATACGAAGAATATAATGAAACAGCAGTGAAA
CAAAGCTTAGGCTACTTAGAAGAGAAACGCCTTTGGTCTGATTTCGCAGAGCTAACTGAACAATTAGGTGACTTTCATTT
TGAGAAGAGAAACTATGCAGAGGGAAGAAACTTTTTAAAGAAAACCATACATGCCCAAACACAAATCCTTAAGGTTACGG
AGGCTATATCATGA

Domains

Predicted by InterProScan.

• MalT-like TPR region (TPR_MalT) (156-296)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.534	98.939	0.371