Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT44_RS08855 Genome accession   NZ_CP035455
Coordinates   1713742..1714455 (+) Length   237 a.a.
NCBI ID   WP_136021843.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm197     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1708742..1719455
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT44_RS08845 (ETT44_08835) treC 1709811..1711439 (-) 1629 WP_021733072.1 alpha,alpha-phosphotrehalase -
  ETT44_RS08850 (ETT44_08840) treP 1711507..1713531 (-) 2025 WP_023080297.1 PTS system trehalose-specific EIIBC component -
  ETT44_RS08855 (ETT44_08845) treR 1713742..1714455 (+) 714 WP_136021843.1 trehalose operon repressor Regulator
  ETT44_RS08865 (ETT44_08855) - 1714735..1715001 (-) 267 WP_076637095.1 helix-turn-helix domain-containing protein -
  ETT44_RS08870 (ETT44_08860) - 1715259..1716116 (+) 858 WP_023605347.1 VOC family protein -
  ETT44_RS08875 (ETT44_08865) yaaA 1716158..1716889 (+) 732 WP_002982222.1 peroxide stress protein YaaA -
  ETT44_RS08880 (ETT44_08870) nrdG 1717063..1717677 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT44_RS08885 (ETT44_08875) - 1717677..1718186 (-) 510 WP_002991345.1 GNAT family N-acetyltransferase -
  ETT44_RS08890 (ETT44_08880) - 1718195..1719130 (-) 936 WP_136021842.1 Gfo/Idh/MocA family protein -
  ETT44_RS09350 - 1719159..1719305 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27619.81 Da        Isoelectric Point: 9.7515

>NTDB_id=342539 ETT44_RS08855 WP_136021843.1 1713742..1714455(+) (treR) [Streptococcus pyogenes strain emm197]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAINKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=342539 ETT44_RS08855 WP_136021843.1 1713742..1714455(+) (treR) [Streptococcus pyogenes strain emm197]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTAATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(91-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

67.949

98.734

0.671

Multiple sequence alignment