Detailed information NTG0342450

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: ETT45_RS01380
• Genome accession: NZ_CP035454
• Coordinates: 253673..254596 (+)
• Length: 307 a.a.
• NCBI ID: WP_136129581.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain emm54
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 248673..259596

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETT45_RS01365 (ETT45_01365)	amiC	250173..251675 (+)	1503	WP_002992227.1	ABC transporter permease	Regulator
ETT45_RS01370 (ETT45_01370)	amiD	251675..252601 (+)	927	WP_002986004.1	oligopeptide ABC transporter permease OppC	Regulator
ETT45_RS01375 (ETT45_01375)	amiE	252610..253680 (+)	1071	WP_002992231.1	ABC transporter ATP-binding protein	Regulator
ETT45_RS01380 (ETT45_01380)	amiF	253673..254596 (+)	924	WP_136129581.1	ABC transporter ATP-binding protein	Regulator
ETT45_RS09130 (ETT45_01385)	-	254634..254723 (-)	90	WP_109821088.1	IS3 family transposase	-
ETT45_RS08770	-	254744..254989 (-)	246	WP_186789748.1	transposase	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34642.90 Da
• Isoelectric Point: 7.2025

>NTDB_id=342450 ETT45_RS01380 WP_136129581.1 253673..254596(+) (amiF) [Streptococcus pyogenes strain emm54]
MSEKLVEVKDLKISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAGKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERQKELVVYHPDQHDYTLDKPSMVEIKPNHFVWANQAEIEKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=342450 ETT45_RS01380 WP_136129581.1 253673..254596(+) (amiF) [Streptococcus pyogenes strain emm54]
ATGTCTGAGAAATTAGTCGAAGTAAAAGACCTAAAAATTTCCTTCGGAGAAGGAAAGAAAAAATTTGTTGCAGTTAAAAA
TGCTAATTTCTTTATTAAAAAAGGAGAAACCTTTTCTTTAGTTGGAGAATCTGGGAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAACGATACTAGCTCAGGTCAAATTTTATACGATGGGAAAGTAATTAATGGCAGAAAATCAAAGTCA
GAAGCCAATGAGCTCATTCGTAAAATTCAAATGATTTTCCAAGATCCCGCTGCTAGTTTGAATGAACGGGCAACCGTTGA
CTACATCATTTCAGAAGGTCTTTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGCTATCAGAGCATTTGACGCGCTACCCTCATGAATTTTCAGGAGGTCAACGTCAGCGGATCGGT
ATCGCTAGAGCCCTAGTAATGAACCCTGAATTCGTTATTGCTGATGAGCCGATTTCAGCTTTGGACGTTTCCGTTCGCGC
ACAGGTTTTAAACCTTCTCAAACGGATGCAAGCCGGAAAAGGTTTGACTTATCTCTTCATTGCCCATGATCTTTCAGTCG
TTCGCTTTATTTCAGATCGTATTGCGGTTATCCATAAAGGGGTTATTGTAGAAGTTGCAGAAACAGAAGAACTGTTTAAT
AACCCAATTCATCCCTACACCCAATCTTTGTTATCAGCCGTGCCTATCCCAGATCCAATTTTAGAGCGTCAAAAAGAACT
TGTTGTCTATCATCCAGACCAGCATGATTATACATTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTGAAAAATATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	81.699	99.674	0.814
amiF	Streptococcus thermophilus LMD-9	81.373	99.674	0.811
amiF	Streptococcus salivarius strain HSISS4	81.373	99.674	0.811