Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT46_RS08935 Genome accession   NZ_CP035453
Coordinates   1743377..1744090 (+) Length   237 a.a.
NCBI ID   WP_136265074.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm100     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1738377..1749090
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT46_RS08925 (ETT46_08920) treC 1739447..1741075 (-) 1629 WP_136265070.1 alpha,alpha-phosphotrehalase -
  ETT46_RS08930 (ETT46_08925) treP 1741142..1743166 (-) 2025 WP_136265072.1 PTS system trehalose-specific EIIBC component -
  ETT46_RS08935 (ETT46_08930) treR 1743377..1744090 (+) 714 WP_136265074.1 trehalose operon repressor Regulator
  ETT46_RS08945 (ETT46_08940) - 1744369..1744708 (-) 340 Protein_1674 winged helix-turn-helix transcriptional regulator -
  ETT46_RS08950 (ETT46_08945) - 1744894..1745751 (+) 858 WP_136098195.1 VOC family protein -
  ETT46_RS08955 (ETT46_08950) yaaA 1745793..1746524 (+) 732 WP_023079177.1 peroxide stress protein YaaA -
  ETT46_RS08960 (ETT46_08955) nrdG 1746698..1747312 (-) 615 WP_021775544.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT46_RS08965 (ETT46_08960) - 1747327..1747821 (-) 495 WP_031488766.1 GNAT family N-acetyltransferase -
  ETT46_RS08970 (ETT46_08965) - 1747830..1748765 (-) 936 WP_136265076.1 Gfo/Idh/MocA family protein -
  ETT46_RS09555 - 1748794..1748940 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27612.73 Da        Isoelectric Point: 9.6307

>NTDB_id=342428 ETT46_RS08935 WP_136265074.1 1743377..1744090(+) (treR) [Streptococcus pyogenes strain emm100]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLSWRVTRQRVVESVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRAK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=342428 ETT46_RS08935 WP_136265074.1 1743377..1744090(+) (treR) [Streptococcus pyogenes strain emm100]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGAGCTGGCGTGTTACACGCCAACGCGTTGTTGAGAGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGAGCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

67.521

98.734

0.667

Multiple sequence alignment