Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ETT47_RS08835 Genome accession   NZ_CP035452
Coordinates   54057..54155 (+) Length   32 a.a.
NCBI ID   WP_020833188.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm123     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 49057..59155
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT47_RS00320 (ETT47_00320) - 49922..51262 (+) 1341 WP_136099258.1 hypothetical protein -
  ETT47_RS00325 (ETT47_00325) purB 51631..52923 (+) 1293 WP_136099259.1 adenylosuccinate lyase -
  ETT47_RS00330 (ETT47_00330) comR 53055..53966 (+) 912 WP_011888526.1 XRE family transcriptional regulator Regulator
  ETT47_RS08835 comS 54057..54155 (+) 99 WP_020833188.1 quorum-sensing system DWW-type pheromone Regulator
  ETT47_RS00335 (ETT47_00335) ruvB 54186..55184 (+) 999 WP_014407198.1 Holliday junction branch migration DNA helicase RuvB -
  ETT47_RS00340 (ETT47_00340) - 55322..55759 (+) 438 WP_002994668.1 low molecular weight protein-tyrosine-phosphatase -
  ETT47_RS00345 (ETT47_00345) - 55782..56183 (+) 402 WP_012560369.1 MORN repeat-containing protein -
  ETT47_RS00350 (ETT47_00350) - 56180..57955 (+) 1776 WP_136099260.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 32 a.a.        Molecular weight: 3758.63 Da        Isoelectric Point: 10.7919

>NTDB_id=342376 ETT47_RS08835 WP_020833188.1 54057..54155(+) (comS) [Streptococcus pyogenes strain emm123]
MLKKVKPFLLLAAVVAFKVARVMHEFDWWNLG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=342376 ETT47_RS08835 WP_020833188.1 54057..54155(+) (comS) [Streptococcus pyogenes strain emm123]
ATGTTAAAAAAAGTTAAGCCATTTTTACTATTAGCCGCAGTAGTTGCATTTAAAGTTGCTCGTGTAATGCATGAATTTGA
TTGGTGGAATCTTGGTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS315

100

100

1
  comS Streptococcus pyogenes MGAS8232

45.161

96.875

0.437

Multiple sequence alignment