Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT47_RS08335 Genome accession   NZ_CP035452
Coordinates   1684175..1684888 (+) Length   237 a.a.
NCBI ID   WP_002992823.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm123     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1679175..1689888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT47_RS08325 (ETT47_08315) treC 1680245..1681873 (-) 1629 WP_136097890.1 alpha,alpha-phosphotrehalase -
  ETT47_RS08330 (ETT47_08320) treP 1681940..1683964 (-) 2025 WP_136099147.1 PTS system trehalose-specific EIIBC component -
  ETT47_RS08335 (ETT47_08325) treR 1684175..1684888 (+) 714 WP_002992823.1 trehalose operon repressor Regulator
  ETT47_RS08345 (ETT47_08335) - 1685199..1685497 (-) 299 Protein_1540 winged helix-turn-helix transcriptional regulator -
  ETT47_RS08350 (ETT47_08340) - 1685684..1686541 (+) 858 WP_136099146.1 VOC family protein -
  ETT47_RS08355 (ETT47_08345) yaaA 1686583..1687314 (+) 732 WP_136099145.1 peroxide stress protein YaaA -
  ETT47_RS08360 (ETT47_08350) nrdG 1687488..1688102 (-) 615 WP_136018191.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT47_RS08365 (ETT47_08355) - 1688117..1688611 (-) 495 WP_014407930.1 GNAT family N-acetyltransferase -
  ETT47_RS08370 (ETT47_08360) - 1688620..1689555 (-) 936 WP_136018192.1 Gfo/Idh/MocA family protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27620.79 Da        Isoelectric Point: 9.6307

>NTDB_id=342371 ETT47_RS08335 WP_002992823.1 1684175..1684888(+) (treR) [Streptococcus pyogenes strain emm123]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=342371 ETT47_RS08335 WP_002992823.1 1684175..1684888(+) (treR) [Streptococcus pyogenes strain emm123]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675

Multiple sequence alignment