Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | F7O57_RS04875 | Genome accession | NZ_CP044403 |
| Coordinates | 954294..954734 (-) | Length | 146 a.a. |
| NCBI ID | WP_000360895.1 | Uniprot ID | B7LFX5 |
| Organism | Escherichia coli strain NMBU-W10C18 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 949294..959734
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7O57_RS04855 (F7O57_05065) | coaE | 949784..950404 (-) | 621 | WP_001269520.1 | dephospho-CoA kinase | - |
| F7O57_RS26160 | - | 950429..950473 (+) | 45 | WP_120795372.1 | protein YacM | - |
| F7O57_RS04860 (F7O57_05070) | guaC | 950629..951672 (+) | 1044 | WP_001217338.1 | GMP reductase | - |
| F7O57_RS04865 (F7O57_05075) | hofC | 951707..952909 (-) | 1203 | WP_000157236.1 | protein transport protein HofC | - |
| F7O57_RS04870 (F7O57_05080) | pilB | 952899..954284 (-) | 1386 | WP_001025174.1 | type II secretion system protein GspE | Machinery gene |
| F7O57_RS04875 (F7O57_05085) | pilA | 954294..954734 (-) | 441 | WP_000360895.1 | prepilin peptidase-dependent pilin | Machinery gene |
| F7O57_RS04880 (F7O57_05090) | nadC | 954937..955830 (-) | 894 | WP_001135174.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| F7O57_RS04885 (F7O57_05095) | ampD | 955918..956469 (+) | 552 | WP_000923721.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| F7O57_RS04890 (F7O57_05100) | ampE | 956466..957320 (+) | 855 | WP_000172000.1 | beta-lactamase regulator AmpE | - |
| F7O57_RS04895 (F7O57_05105) | aroP | 957363..958736 (-) | 1374 | WP_001347572.1 | aromatic amino acid transporter AroP | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15602.71 Da Isoelectric Point: 4.3927
>NTDB_id=342370 F7O57_RS04875 WP_000360895.1 954294..954734(-) (pilA) [Escherichia coli strain NMBU-W10C18]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTH
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTH
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=342370 F7O57_RS04875 WP_000360895.1 954294..954734(-) (pilA) [Escherichia coli strain NMBU-W10C18]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCAC
TATGTTTCAGCCATGAGTGTGGCAAAAGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGACTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCAC
TATGTTTCAGCCATGAGTGTGGCAAAAGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGACTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |