Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ETT47_RS06800 Genome accession   NZ_CP035452
Coordinates   1360076..1360801 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain emm123     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1355076..1365801
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT47_RS06765 (ETT47_06755) - 1355110..1355406 (-) 297 WP_002983486.1 YlxR family protein -
  ETT47_RS06770 (ETT47_06760) nusA 1355422..1356579 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  ETT47_RS06775 (ETT47_06765) rimP 1356754..1357290 (-) 537 WP_172450027.1 ribosome maturation factor RimP -
  ETT47_RS06785 (ETT47_06775) trmB 1357549..1358184 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT47_RS06790 (ETT47_06780) ccrZ 1358184..1358975 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT47_RS06795 (ETT47_06785) - 1359039..1360073 (-) 1035 WP_002994331.1 ABC transporter permease -
  ETT47_RS06800 (ETT47_06790) pptA 1360076..1360801 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ETT47_RS06805 (ETT47_06795) - 1360873..1361292 (+) 420 WP_002983376.1 HIT family protein -
  ETT47_RS06810 (ETT47_06800) - 1361289..1361609 (+) 321 WP_136099180.1 chemotaxis protein -
  ETT47_RS06815 (ETT47_06805) - 1361756..1363030 (-) 1275 WP_136099181.1 LCP family protein -
  ETT47_RS06820 (ETT47_06810) - 1363039..1363563 (-) 525 WP_109991544.1 GNAT family N-acetyltransferase -
  ETT47_RS06825 (ETT47_06815) tsaE 1363538..1363999 (-) 462 WP_011184866.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ETT47_RS06830 (ETT47_06820) - 1364153..1365613 (-) 1461 WP_023609915.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=342365 ETT47_RS06800 WP_002983379.1 1360076..1360801(-) (pptA) [Streptococcus pyogenes strain emm123]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=342365 ETT47_RS06800 WP_002983379.1 1360076..1360801(-) (pptA) [Streptococcus pyogenes strain emm123]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACTACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCGATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGCTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment