Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ETT47_RS05970 Genome accession   NZ_CP035452
Coordinates   1196054..1197091 (-) Length   345 a.a.
NCBI ID   WP_010922499.1    Uniprot ID   A0A4U9I5V9
Organism   Streptococcus pyogenes strain emm123     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1191054..1202091
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT47_RS05945 (ETT47_05935) - 1191058..1191585 (-) 528 WP_014635585.1 Dps family protein -
  ETT47_RS05950 (ETT47_05940) - 1191813..1192439 (+) 627 WP_002989076.1 A24 family peptidase -
  ETT47_RS05955 (ETT47_05945) rlmN 1192521..1193600 (-) 1080 WP_002992788.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ETT47_RS05960 (ETT47_05950) - 1193604..1194224 (-) 621 WP_032464468.1 YutD family protein -
  ETT47_RS05965 (ETT47_05955) - 1194672..1195649 (-) 978 WP_002994809.1 LacI family DNA-binding transcriptional regulator -
  ETT47_RS05970 (ETT47_05960) sepM 1196054..1197091 (-) 1038 WP_010922499.1 SepM family pheromone-processing serine protease Regulator
  ETT47_RS05975 (ETT47_05965) coaD 1197078..1197569 (-) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  ETT47_RS05980 (ETT47_05970) rsmD 1197559..1198098 (-) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ETT47_RS05985 (ETT47_05975) asnA 1198221..1199213 (-) 993 WP_136099225.1 aspartate--ammonia ligase -
  ETT47_RS05990 (ETT47_05980) arcC 1199526..1200476 (-) 951 WP_010922501.1 carbamate kinase -
  ETT47_RS05995 (ETT47_05985) - 1200496..1201827 (-) 1332 WP_136099226.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37541.24 Da        Isoelectric Point: 9.6692

>NTDB_id=342360 ETT47_RS05970 WP_010922499.1 1196054..1197091(-) (sepM) [Streptococcus pyogenes strain emm123]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=342360 ETT47_RS05970 WP_010922499.1 1196054..1197091(-) (sepM) [Streptococcus pyogenes strain emm123]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCGCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9I5V9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.275

100

0.693


Multiple sequence alignment