Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT49_RS08025 Genome accession   NZ_CP035450
Coordinates   1609186..1609899 (+) Length   237 a.a.
NCBI ID   WP_136112432.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm93.4     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1604186..1614899
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT49_RS08015 (ETT49_08010) treC 1605255..1606883 (-) 1629 WP_021733072.1 alpha,alpha-phosphotrehalase -
  ETT49_RS08020 (ETT49_08015) treP 1606951..1608975 (-) 2025 WP_136269302.1 PTS system trehalose-specific EIIBC component -
  ETT49_RS08025 (ETT49_08020) treR 1609186..1609899 (+) 714 WP_136112432.1 trehalose operon repressor Regulator
  ETT49_RS08035 (ETT49_08030) - 1610179..1610517 (-) 339 Protein_1479 winged helix-turn-helix transcriptional regulator -
  ETT49_RS08040 (ETT49_08035) - 1610703..1611550 (+) 848 Protein_1480 VOC family protein -
  ETT49_RS08045 (ETT49_08040) yaaA 1611592..1612323 (+) 732 WP_023612602.1 peroxide stress protein YaaA -
  ETT49_RS08050 (ETT49_08045) nrdG 1612497..1613111 (-) 615 WP_136269304.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT49_RS08055 (ETT49_08050) - 1613111..1613620 (-) 510 WP_136269306.1 GNAT family N-acetyltransferase -
  ETT49_RS08060 (ETT49_08055) - 1613629..1614564 (-) 936 WP_136269308.1 Gfo/Idh/MocA family protein -
  ETT49_RS08570 - 1614593..1614739 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27639.84 Da        Isoelectric Point: 9.7513

>NTDB_id=342263 ETT49_RS08025 WP_136112432.1 1609186..1609899(+) (treR) [Streptococcus pyogenes strain emm93.4]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQRVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=342263 ETT49_RS08025 WP_136112432.1 1609186..1609899(+) (treR) [Streptococcus pyogenes strain emm93.4]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACGTGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(91-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

67.949

98.734

0.671

Multiple sequence alignment