Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ETT49_RS06505 Genome accession   NZ_CP035450
Coordinates   1287789..1288514 (-) Length   241 a.a.
NCBI ID   WP_136269352.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm93.4     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1282789..1293514
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT49_RS06470 (ETT49_06465) rnpM 1282823..1283119 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  ETT49_RS06475 (ETT49_06470) nusA 1283135..1284292 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  ETT49_RS06480 (ETT49_06475) rimP 1284467..1285003 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT49_RS06490 (ETT49_06485) trmB 1285262..1285897 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT49_RS06495 (ETT49_06490) ccrZ 1285897..1286688 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT49_RS06500 (ETT49_06495) - 1286752..1287786 (-) 1035 WP_136269354.1 ABC transporter permease -
  ETT49_RS06505 (ETT49_06500) pptA 1287789..1288514 (-) 726 WP_136269352.1 ABC transporter ATP-binding protein Regulator
  ETT49_RS06510 (ETT49_06505) - 1288586..1289005 (+) 420 WP_002988659.1 HIT family protein -
  ETT49_RS06515 (ETT49_06510) - 1289002..1289358 (+) 357 WP_002988657.1 hypothetical protein -
  ETT49_RS06520 (ETT49_06515) brpA 1289469..1290749 (-) 1281 WP_002988654.1 biofilm formation/cell division transcriptional regulator BrpA -
  ETT49_RS06525 (ETT49_06520) - 1290758..1291282 (-) 525 WP_136269350.1 GNAT family N-acetyltransferase -
  ETT49_RS06530 (ETT49_06525) tsaE 1291257..1291718 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ETT49_RS06535 (ETT49_06530) - 1291872..1293332 (-) 1461 WP_002988645.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26735.80 Da        Isoelectric Point: 4.5624

>NTDB_id=342257 ETT49_RS06505 WP_136269352.1 1287789..1288514(-) (pptA) [Streptococcus pyogenes strain emm93.4]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFNDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=342257 ETT49_RS06505 WP_136269352.1 1287789..1288514(-) (pptA) [Streptococcus pyogenes strain emm93.4]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTAATGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.385

99.17

0.718
  pptA Streptococcus thermophilus LMD-9

71.548

99.17

0.71

Multiple sequence alignment