Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ETT49_RS02360 Genome accession   NZ_CP035450
Coordinates   429343..430152 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm93.4     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 424343..435152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT49_RS02340 (ETT49_02335) - 424785..426032 (+) 1248 WP_136269207.1 AMP-binding protein -
  ETT49_RS02345 (ETT49_02340) - 426088..427122 (+) 1035 WP_186787901.1 DUF3114 domain-containing protein -
  ETT49_RS02350 (ETT49_02345) vicR 427284..427994 (+) 711 WP_002985645.1 response regulator YycF Regulator
  ETT49_RS02355 (ETT49_02350) vicK 427987..429339 (+) 1353 WP_002995609.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ETT49_RS02360 (ETT49_02355) vicX 429343..430152 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  ETT49_RS02365 (ETT49_02360) rnc 430595..431287 (+) 693 WP_002990670.1 ribonuclease III -
  ETT49_RS02370 (ETT49_02365) smc 431288..434827 (+) 3540 WP_136269205.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=342241 ETT49_RS02360 WP_002985641.1 429343..430152(+) (vicX) [Streptococcus pyogenes strain emm93.4]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=342241 ETT49_RS02360 WP_002985641.1 429343..430152(+) (vicX) [Streptococcus pyogenes strain emm93.4]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment