Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT50_RS08975 Genome accession   NZ_CP035449
Coordinates   1745184..1745897 (+) Length   237 a.a.
NCBI ID   WP_032465299.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm56     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1740184..1750897
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT50_RS08965 (ETT50_08960) treC 1741254..1742882 (-) 1629 WP_032465297.1 alpha,alpha-phosphotrehalase -
  ETT50_RS08970 (ETT50_08965) treP 1742949..1744973 (-) 2025 WP_032465298.1 PTS system trehalose-specific EIIBC component -
  ETT50_RS08975 (ETT50_08970) treR 1745184..1745897 (+) 714 WP_032465299.1 trehalose operon repressor Regulator
  ETT50_RS08985 (ETT50_08980) - 1746176..1746515 (-) 340 Protein_1675 winged helix-turn-helix transcriptional regulator -
  ETT50_RS08990 (ETT50_08985) - 1746701..1747558 (+) 858 WP_032465300.1 VOC family protein -
  ETT50_RS08995 (ETT50_08990) yaaA 1747600..1748331 (+) 732 WP_032465301.1 peroxide stress protein YaaA -
  ETT50_RS09000 (ETT50_08995) nrdG 1748505..1749119 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT50_RS09005 (ETT50_09000) - 1749119..1749628 (-) 510 WP_011018311.1 GNAT family N-acetyltransferase -
  ETT50_RS09010 (ETT50_09005) - 1749637..1750572 (-) 936 WP_032465302.1 Gfo/Idh/MocA family protein -
  ETT50_RS09470 - 1750601..1750747 (-) 147 WP_168625362.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27622.77 Da        Isoelectric Point: 9.6390

>NTDB_id=342209 ETT50_RS08975 WP_032465299.1 1745184..1745897(+) (treR) [Streptococcus pyogenes strain emm56]
MTRYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRAK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=342209 ETT50_RS08975 WP_032465299.1 1745184..1745897(+) (treR) [Streptococcus pyogenes strain emm56]
ATGACAAGGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTAG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGAGCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(4-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

67.949

98.734

0.671

Multiple sequence alignment