Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ETT50_RS07305 Genome accession   NZ_CP035449
Coordinates   1407261..1408070 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm56     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1402261..1413070
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT50_RS07295 (ETT50_07295) smc 1402597..1406136 (-) 3540 WP_032464867.1 chromosome segregation protein SMC -
  ETT50_RS07300 (ETT50_07300) rnc 1406137..1406829 (-) 693 WP_002990670.1 ribonuclease III -
  ETT50_RS07305 (ETT50_07305) vicX 1407261..1408070 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  ETT50_RS07310 (ETT50_07310) vicK 1408074..1409426 (-) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ETT50_RS07315 (ETT50_07315) vicR 1409419..1410129 (-) 711 WP_002985645.1 response regulator YycF Regulator
  ETT50_RS07320 (ETT50_07320) - 1410291..1411325 (-) 1035 WP_161761900.1 DUF3114 domain-containing protein -
  ETT50_RS07325 (ETT50_07325) - 1411381..1412628 (-) 1248 WP_011284594.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=342199 ETT50_RS07305 WP_002985641.1 1407261..1408070(-) (vicX) [Streptococcus pyogenes strain emm56]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=342199 ETT50_RS07305 WP_002985641.1 1407261..1408070(-) (vicX) [Streptococcus pyogenes strain emm56]
ATGAATGAGAGTGGTTTTAAATACAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGCAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment