Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | F7G16_RS08205 | Genome accession | NZ_CP044352 |
| Coordinates | 1842901..1844094 (+) | Length | 397 a.a. |
| NCBI ID | WP_004572891.1 | Uniprot ID | B2I4S3 |
| Organism | Xylella fastidiosa strain ATCC 35879 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1837901..1849094
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7G16_RS12280 | - | 1838128..1839300 (-) | 1173 | Protein_1590 | anthranilate synthase component I family protein | - |
| F7G16_RS12660 (F7G16_08500) | - | 1839282..1839566 (-) | 285 | WP_118853459.1 | hypothetical protein | - |
| F7G16_RS08185 (F7G16_08510) | - | 1839919..1840725 (+) | 807 | WP_004572888.1 | TatD family hydrolase | - |
| F7G16_RS08190 | - | 1840722..1840895 (+) | 174 | WP_161594829.1 | hypothetical protein | - |
| F7G16_RS08195 (F7G16_08515) | - | 1840945..1841505 (-) | 561 | WP_004572889.1 | HNH endonuclease | - |
| F7G16_RS08200 (F7G16_08520) | - | 1841855..1842328 (-) | 474 | WP_004572890.1 | hypothetical protein | - |
| F7G16_RS08205 (F7G16_08525) | pilA | 1842901..1844094 (+) | 1194 | WP_004572891.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| F7G16_RS08210 (F7G16_08530) | mutY | 1844194..1845243 (+) | 1050 | WP_004572892.1 | A/G-specific adenine glycosylase | - |
| F7G16_RS08215 (F7G16_08535) | - | 1845278..1845550 (+) | 273 | WP_011097829.1 | oxidative damage protection protein | - |
| F7G16_RS08220 (F7G16_08540) | - | 1845604..1846137 (+) | 534 | WP_228446171.1 | DUF2726 domain-containing protein | - |
| F7G16_RS08225 (F7G16_08545) | - | 1846266..1847000 (+) | 735 | WP_004572895.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| F7G16_RS08230 (F7G16_08550) | ruvC | 1847120..1847641 (+) | 522 | WP_011097831.1 | crossover junction endodeoxyribonuclease RuvC | - |
| F7G16_RS08235 (F7G16_08555) | ruvA | 1847727..1848311 (+) | 585 | WP_004572897.1 | Holliday junction branch migration protein RuvA | - |
Sequence
Protein
Download Length: 397 a.a. Molecular weight: 42821.04 Da Isoelectric Point: 8.0970
>NTDB_id=342180 F7G16_RS08205 WP_004572891.1 1842901..1844094(+) (pilA) [Xylella fastidiosa strain ATCC 35879]
MLSFLRRKKPTNAISDNERSKYSAEEMAAAFPKAPSLDEAPDQGQTSTTPLLSSADQPALLTHSTSSAFTELVISTCNDT
SGASTPTVSVDKPNWRERLRGSLFARNINALFSNNPRLDENLLDEIETALITADVGVSTTNAIVDGLRKRMKAREFADIQ
TLLAALRNELITILRPVSKPLIVKRDALPFVFLVVGVNGVGKTTTIGKLAKWFKRDGYSLMLAAGDTFRAAAVAQLQAWG
ERNSITVIAQKGPNADAASVVYDALQAAKARSIEVLIADTAGRLHTQIGLMNELSKIRRVLGKLDSTAPHEVLMVIDGTT
GQNALSQLRQFHAAVNVTGIVVTKLDGTAKGGVVFTLAREFGIPIHFISIGEQLEDMHFFDPEAFVDALLPKTLGNA
MLSFLRRKKPTNAISDNERSKYSAEEMAAAFPKAPSLDEAPDQGQTSTTPLLSSADQPALLTHSTSSAFTELVISTCNDT
SGASTPTVSVDKPNWRERLRGSLFARNINALFSNNPRLDENLLDEIETALITADVGVSTTNAIVDGLRKRMKAREFADIQ
TLLAALRNELITILRPVSKPLIVKRDALPFVFLVVGVNGVGKTTTIGKLAKWFKRDGYSLMLAAGDTFRAAAVAQLQAWG
ERNSITVIAQKGPNADAASVVYDALQAAKARSIEVLIADTAGRLHTQIGLMNELSKIRRVLGKLDSTAPHEVLMVIDGTT
GQNALSQLRQFHAAVNVTGIVVTKLDGTAKGGVVFTLAREFGIPIHFISIGEQLEDMHFFDPEAFVDALLPKTLGNA
Nucleotide
Download Length: 1194 bp
>NTDB_id=342180 F7G16_RS08205 WP_004572891.1 1842901..1844094(+) (pilA) [Xylella fastidiosa strain ATCC 35879]
ATGTTAAGCTTTCTACGCCGCAAGAAGCCCACCAATGCCATCAGCGACAACGAGCGGAGCAAATACAGTGCTGAAGAGAT
GGCTGCTGCCTTTCCAAAAGCTCCTTCGTTGGATGAGGCTCCAGACCAAGGGCAAACTAGCACCACGCCATTGCTATCTT
CAGCAGATCAGCCTGCGTTACTGACCCACTCTACGAGTAGTGCCTTTACAGAGCTAGTAATCTCCACTTGCAACGACACA
TCGGGGGCGAGTACCCCAACAGTTTCGGTGGATAAACCCAATTGGCGTGAGCGCCTACGTGGCAGTCTCTTCGCGCGGAA
CATCAATGCTTTATTCTCGAATAACCCGCGTTTGGATGAAAATCTGCTTGATGAGATTGAAACCGCGTTGATTACGGCTG
ATGTAGGCGTGTCTACGACTAATGCAATAGTTGACGGTTTGCGTAAACGTATGAAAGCACGTGAATTCGCTGATATCCAA
ACACTGTTAGCTGCATTACGTAATGAATTAATCACGATACTGCGTCCTGTTTCTAAACCACTGATCGTCAAACGCGATGC
ACTTCCATTTGTGTTTCTTGTTGTAGGTGTCAATGGTGTTGGTAAGACTACAACAATCGGCAAGTTGGCGAAGTGGTTCA
AGAGGGATGGCTACAGCTTGATGTTGGCTGCCGGTGATACCTTCCGTGCTGCCGCTGTCGCGCAGTTACAGGCATGGGGC
GAGCGTAATAGTATTACGGTGATCGCACAAAAAGGACCGAATGCAGATGCTGCTTCGGTAGTCTATGATGCGCTGCAAGC
AGCCAAGGCGCGTAGCATTGAGGTGCTCATCGCCGATACCGCAGGCCGCCTGCATACCCAAATTGGTTTAATGAACGAGT
TGAGCAAAATCCGCCGTGTGCTCGGTAAGCTTGATAGCACCGCACCACATGAAGTACTGATGGTGATTGACGGTACTACT
GGGCAAAATGCGCTTTCGCAATTACGCCAATTTCATGCTGCCGTGAACGTCACTGGTATTGTGGTAACCAAGCTTGATGG
CACTGCCAAGGGCGGGGTAGTCTTCACGTTGGCACGTGAATTTGGCATTCCAATCCACTTCATCAGCATAGGCGAGCAGC
TGGAAGATATGCATTTTTTTGACCCTGAGGCATTCGTAGACGCGCTACTGCCAAAAACATTAGGAAATGCTTAA
ATGTTAAGCTTTCTACGCCGCAAGAAGCCCACCAATGCCATCAGCGACAACGAGCGGAGCAAATACAGTGCTGAAGAGAT
GGCTGCTGCCTTTCCAAAAGCTCCTTCGTTGGATGAGGCTCCAGACCAAGGGCAAACTAGCACCACGCCATTGCTATCTT
CAGCAGATCAGCCTGCGTTACTGACCCACTCTACGAGTAGTGCCTTTACAGAGCTAGTAATCTCCACTTGCAACGACACA
TCGGGGGCGAGTACCCCAACAGTTTCGGTGGATAAACCCAATTGGCGTGAGCGCCTACGTGGCAGTCTCTTCGCGCGGAA
CATCAATGCTTTATTCTCGAATAACCCGCGTTTGGATGAAAATCTGCTTGATGAGATTGAAACCGCGTTGATTACGGCTG
ATGTAGGCGTGTCTACGACTAATGCAATAGTTGACGGTTTGCGTAAACGTATGAAAGCACGTGAATTCGCTGATATCCAA
ACACTGTTAGCTGCATTACGTAATGAATTAATCACGATACTGCGTCCTGTTTCTAAACCACTGATCGTCAAACGCGATGC
ACTTCCATTTGTGTTTCTTGTTGTAGGTGTCAATGGTGTTGGTAAGACTACAACAATCGGCAAGTTGGCGAAGTGGTTCA
AGAGGGATGGCTACAGCTTGATGTTGGCTGCCGGTGATACCTTCCGTGCTGCCGCTGTCGCGCAGTTACAGGCATGGGGC
GAGCGTAATAGTATTACGGTGATCGCACAAAAAGGACCGAATGCAGATGCTGCTTCGGTAGTCTATGATGCGCTGCAAGC
AGCCAAGGCGCGTAGCATTGAGGTGCTCATCGCCGATACCGCAGGCCGCCTGCATACCCAAATTGGTTTAATGAACGAGT
TGAGCAAAATCCGCCGTGTGCTCGGTAAGCTTGATAGCACCGCACCACATGAAGTACTGATGGTGATTGACGGTACTACT
GGGCAAAATGCGCTTTCGCAATTACGCCAATTTCATGCTGCCGTGAACGTCACTGGTATTGTGGTAACCAAGCTTGATGG
CACTGCCAAGGGCGGGGTAGTCTTCACGTTGGCACGTGAATTTGGCATTCCAATCCACTTCATCAGCATAGGCGAGCAGC
TGGAAGATATGCATTTTTTTGACCCTGAGGCATTCGTAGACGCGCTACTGCCAAAAACATTAGGAAATGCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
42.857 |
89.924 |
0.385 |