Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ETT50_RS02170 Genome accession   NZ_CP035449
Coordinates   410362..411087 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain emm56     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 405362..416087
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT50_RS02140 (ETT50_02140) - 405550..407010 (+) 1461 WP_023609915.1 NCS2 family permease -
  ETT50_RS02145 (ETT50_02145) tsaE 407164..407625 (+) 462 WP_023609939.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ETT50_RS02150 (ETT50_02150) - 407600..408124 (+) 525 WP_032465186.1 GNAT family N-acetyltransferase -
  ETT50_RS02155 (ETT50_02155) - 408133..409407 (+) 1275 WP_020837594.1 biofilm formation/cell division transcriptional regulator BrpA -
  ETT50_RS02160 (ETT50_02160) - 409518..409874 (-) 357 WP_032465185.1 hypothetical protein -
  ETT50_RS02165 (ETT50_02165) - 409871..410290 (-) 420 WP_002983376.1 HIT family protein -
  ETT50_RS02170 (ETT50_02170) pptA 410362..411087 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ETT50_RS02175 (ETT50_02175) - 411090..412124 (+) 1035 WP_032465183.1 ABC transporter permease -
  ETT50_RS02180 (ETT50_02180) ccrZ 412188..412979 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT50_RS02185 (ETT50_02185) trmB 412979..413614 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT50_RS02195 (ETT50_02195) rimP 413873..414409 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT50_RS02200 (ETT50_02200) nusA 414584..415741 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  ETT50_RS02205 (ETT50_02205) rnpM 415757..416053 (+) 297 WP_002983486.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=342179 ETT50_RS02170 WP_002983379.1 410362..411087(+) (pptA) [Streptococcus pyogenes strain emm56]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=342179 ETT50_RS02170 WP_002983379.1 410362..411087(+) (pptA) [Streptococcus pyogenes strain emm56]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment