Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT52_RS08735 Genome accession   NZ_CP035447
Coordinates   1723201..1723914 (+) Length   237 a.a.
NCBI ID   WP_136026289.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm97.1     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1718201..1728914
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT52_RS08725 (ETT52_08715) treC 1719271..1720899 (-) 1629 WP_136026291.1 alpha,alpha-phosphotrehalase -
  ETT52_RS08730 (ETT52_08720) treP 1720966..1722990 (-) 2025 WP_136026290.1 PTS system trehalose-specific EIIBC component -
  ETT52_RS08735 (ETT52_08725) treR 1723201..1723914 (+) 714 WP_136026289.1 trehalose operon repressor Regulator
  ETT52_RS08745 (ETT52_08735) - 1724151..1724459 (-) 309 WP_136026287.1 helix-turn-helix domain-containing protein -
  ETT52_RS08750 (ETT52_08740) - 1724720..1725577 (+) 858 WP_136026286.1 VOC family protein -
  ETT52_RS08755 (ETT52_08745) yaaA 1725619..1726350 (+) 732 WP_109821232.1 peroxide stress protein YaaA -
  ETT52_RS08760 (ETT52_08750) nrdG 1726524..1727138 (-) 615 WP_136018191.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT52_RS08765 (ETT52_08755) - 1727153..1727647 (-) 495 WP_014407930.1 GNAT family N-acetyltransferase -
  ETT52_RS08770 (ETT52_08760) - 1727656..1728591 (-) 936 WP_136018192.1 Gfo/Idh/MocA family protein -
  ETT52_RS09240 - 1728620..1728766 (-) 147 WP_023610752.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27624.78 Da        Isoelectric Point: 9.6307

>NTDB_id=342095 ETT52_RS08735 WP_136026289.1 1723201..1723914(+) (treR) [Streptococcus pyogenes strain emm97.1]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLTIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRAK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=342095 ETT52_RS08735 WP_136026289.1 1723201..1723914(+) (treR) [Streptococcus pyogenes strain emm97.1]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCACCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TTCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGAGCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675

Multiple sequence alignment