Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ETT52_RS07130 Genome accession   NZ_CP035447
Coordinates   1383209..1383934 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain emm97.1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1378209..1388934
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT52_RS07095 (ETT52_07085) - 1378243..1378539 (-) 297 WP_002983486.1 YlxR family protein -
  ETT52_RS07100 (ETT52_07090) nusA 1378555..1379712 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  ETT52_RS07105 (ETT52_07095) rimP 1379887..1380423 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT52_RS07115 (ETT52_07105) trmB 1380682..1381317 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT52_RS07120 (ETT52_07110) ccrZ 1381317..1382108 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT52_RS07125 (ETT52_07115) - 1382172..1383206 (-) 1035 WP_010922583.1 ABC transporter permease -
  ETT52_RS07130 (ETT52_07120) pptA 1383209..1383934 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ETT52_RS07135 (ETT52_07125) - 1384006..1384425 (+) 420 WP_136109061.1 HIT family protein -
  ETT52_RS07140 (ETT52_07130) - 1384422..1384778 (+) 357 WP_002988657.1 hypothetical protein -
  ETT52_RS07145 (ETT52_07135) - 1384889..1386163 (-) 1275 WP_136109062.1 LCP family protein -
  ETT52_RS07150 (ETT52_07140) - 1386172..1386696 (-) 525 WP_009880752.1 GNAT family N-acetyltransferase -
  ETT52_RS07155 (ETT52_07145) tsaE 1386671..1387132 (-) 462 WP_136109063.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ETT52_RS07160 (ETT52_07150) - 1387286..1388746 (-) 1461 WP_023609915.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=342089 ETT52_RS07130 WP_002983379.1 1383209..1383934(-) (pptA) [Streptococcus pyogenes strain emm97.1]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=342089 ETT52_RS07130 WP_002983379.1 1383209..1383934(-) (pptA) [Streptococcus pyogenes strain emm97.1]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTCTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTCTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment