Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SALIVB_RS05470 Genome accession   NC_015760
Coordinates   1230428..1230910 (-) Length   160 a.a.
NCBI ID   WP_004182600.1    Uniprot ID   -
Organism   Streptococcus salivarius CCHSS3     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1225428..1235910
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SALIVB_RS05455 (SALIVB_1125) lepB 1227342..1227899 (-) 558 WP_013990669.1 signal peptidase I -
  SALIVB_RS05460 (SALIVB_1126) - 1228021..1229250 (-) 1230 WP_041817239.1 tetratricopeptide repeat protein -
  SALIVB_RS05465 (SALIVB_1127) - 1229240..1230418 (-) 1179 WP_004182599.1 AI-2E family transporter -
  SALIVB_RS05470 (SALIVB_1128) mutX 1230428..1230910 (-) 483 WP_004182600.1 NUDIX hydrolase Machinery gene
  SALIVB_RS05475 (SALIVB_1129) ftsX 1231065..1231994 (-) 930 WP_013990671.1 permease-like cell division protein FtsX -
  SALIVB_RS05480 (SALIVB_1130) ftsE 1231987..1232679 (-) 693 WP_013990672.1 cell division ATP-binding protein FtsE -
  SALIVB_RS05490 (SALIVB_1133) queG 1233917..1235035 (-) 1119 WP_013990673.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18821.17 Da        Isoelectric Point: 4.4433

>NTDB_id=34208 SALIVB_RS05470 WP_004182600.1 1230428..1230910(-) (mutX) [Streptococcus salivarius CCHSS3]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREILEETHFTVTEMDFKGMITFPEFTPGH
DWYTYVFKVTGFEGELISDEESREGTLEWVPYDEVLSKPTWEGDYEIFKWILEDRPFFSAKFVYDRNQNLVDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=34208 SALIVB_RS05470 WP_004182600.1 1230428..1230910(-) (mutX) [Streptococcus salivarius CCHSS3]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGAAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTTGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTCTCGAGGAAACCCATTTTACAGTGACTGAGATGGATTTTAAAGGGATGATTACCTTTCCAGAATTTACCCCTGGTCAT
GATTGGTATACCTATGTCTTTAAGGTAACTGGTTTTGAAGGAGAACTCATCTCAGATGAGGAGTCTCGTGAAGGAACGCT
TGAATGGGTACCATATGATGAGGTCTTATCTAAACCAACTTGGGAAGGTGACTATGAGATCTTCAAGTGGATCCTTGAAG
ATAGACCATTCTTCTCTGCAAAATTTGTCTATGATCGTAACCAAAATTTAGTAGACAAGACTGTAACTTTTTATGATAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

72.327

99.375

0.719

Multiple sequence alignment