Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT53_RS08330 Genome accession   NZ_CP035446
Coordinates   1664689..1665402 (+) Length   237 a.a.
NCBI ID   WP_111676868.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm68.2     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1659689..1670402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT53_RS08320 (ETT53_08315) treC 1660817..1662445 (-) 1629 WP_063629587.1 alpha,alpha-phosphotrehalase -
  ETT53_RS08325 (ETT53_08320) treP 1662466..1664478 (-) 2013 WP_129321528.1 PTS system trehalose-specific EIIBC component -
  ETT53_RS08330 (ETT53_08325) treR 1664689..1665402 (+) 714 WP_111676868.1 trehalose operon repressor Regulator
  ETT53_RS08340 (ETT53_08335) - 1665681..1666019 (-) 339 WP_011018307.1 helix-turn-helix domain-containing protein -
  ETT53_RS08345 (ETT53_08340) - 1666206..1667063 (+) 858 WP_129321529.1 VOC family protein -
  ETT53_RS08350 (ETT53_08345) yaaA 1667105..1667836 (+) 732 WP_111703691.1 peroxide stress protein YaaA -
  ETT53_RS08355 (ETT53_08350) nrdG 1668010..1668624 (-) 615 WP_129321530.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT53_RS08360 (ETT53_08355) - 1668639..1669133 (-) 495 WP_031488766.1 GNAT family N-acetyltransferase -
  ETT53_RS08365 (ETT53_08360) - 1669142..1670077 (-) 936 WP_129321531.1 Gfo/Idh/MocA family protein -
  ETT53_RS08850 - 1670106..1670252 (-) 147 WP_011106921.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27594.75 Da        Isoelectric Point: 9.6307

>NTDB_id=342041 ETT53_RS08330 WP_111676868.1 1664689..1665402(+) (treR) [Streptococcus pyogenes strain emm68.2]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRAK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=342041 ETT53_RS08330 WP_111676868.1 1664689..1665402(+) (treR) [Streptococcus pyogenes strain emm68.2]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGAGCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675

Multiple sequence alignment