Detailed information NTG0342015

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: F7D03_RS08265
• Genome accession: NZ_CP044314
• Coordinates: 1675126..1676109 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain RM9245
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1670126..1681109

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F7D03_RS08225 (F7D03_08225)	-	1671275..1671382 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
F7D03_RS08235 (F7D03_08235)	-	1671758..1671865 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
F7D03_RS08245 (F7D03_08245)	-	1672241..1672348 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
F7D03_RS08255 (F7D03_08255)	yhjV	1672824..1674095 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
F7D03_RS08260 (F7D03_08260)	dppF	1674125..1675129 (-)	1005	WP_000107018.1	dipeptide ABC transporter ATP-binding subunit DppF	-
F7D03_RS08265 (F7D03_08265)	amiE	1675126..1676109 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
F7D03_RS08270 (F7D03_08270)	dppC	1676120..1677022 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
F7D03_RS08275 (F7D03_08275)	dppB	1677032..1678051 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
F7D03_RS08285 (F7D03_08285)	dppA	1678359..1679966 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
F7D03_RS25890	-	1680318..1680818 (-)	501	WP_000469073.1	hypothetical protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=342015 F7D03_RS08265 WP_001196486.1 1675126..1676109(-) (amiE) [Escherichia coli strain RM9245]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=342015 F7D03_RS08265 WP_001196486.1 1675126..1676109(-) (amiE) [Escherichia coli strain RM9245]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404