Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT54_RS08365 Genome accession   NZ_CP035445
Coordinates   1671853..1672566 (+) Length   237 a.a.
NCBI ID   WP_129284221.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm92     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1666853..1677566
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT54_RS08355 (ETT54_08350) treC 1667923..1669551 (-) 1629 WP_136098193.1 alpha,alpha-phosphotrehalase -
  ETT54_RS08360 (ETT54_08355) treP 1669618..1671642 (-) 2025 WP_136098194.1 PTS system trehalose-specific EIIBC component -
  ETT54_RS08365 (ETT54_08360) treR 1671853..1672566 (+) 714 WP_129284221.1 trehalose operon repressor Regulator
  ETT54_RS08375 (ETT54_08370) - 1672845..1673182 (-) 338 Protein_1563 winged helix-turn-helix transcriptional regulator -
  ETT54_RS08380 (ETT54_08375) - 1673369..1674226 (+) 858 WP_136098195.1 VOC family protein -
  ETT54_RS08385 (ETT54_08380) yaaA 1674268..1674999 (+) 732 WP_023079177.1 peroxide stress protein YaaA -
  ETT54_RS08390 (ETT54_08385) nrdG 1675173..1675787 (-) 615 WP_021775544.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT54_RS08395 (ETT54_08390) - 1675802..1676296 (-) 495 WP_136098196.1 GNAT family N-acetyltransferase -
  ETT54_RS08400 (ETT54_08395) - 1676305..1677240 (-) 936 WP_136098197.1 Gfo/Idh/MocA family protein -
  ETT54_RS08870 - 1677269..1677415 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27574.75 Da        Isoelectric Point: 9.6226

>NTDB_id=341989 ETT54_RS08365 WP_129284221.1 1671853..1672566(+) (treR) [Streptococcus pyogenes strain emm92]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIITREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=341989 ETT54_RS08365 WP_129284221.1 1671853..1672566(+) (treR) [Streptococcus pyogenes strain emm92]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATAACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(91-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675

Multiple sequence alignment