Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ETT54_RS02275 Genome accession   NZ_CP035445
Coordinates   428158..428967 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm92     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 423158..433967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT54_RS02255 (ETT54_02250) - 423600..424847 (+) 1248 WP_136094309.1 AMP-binding protein -
  ETT54_RS02260 (ETT54_02255) - 424903..425937 (+) 1035 WP_186789140.1 DUF3114 domain-containing protein -
  ETT54_RS02265 (ETT54_02260) vicR 426099..426809 (+) 711 WP_002985645.1 response regulator YycF Regulator
  ETT54_RS02270 (ETT54_02265) vicK 426802..428154 (+) 1353 WP_002995609.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ETT54_RS02275 (ETT54_02270) vicX 428158..428967 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  ETT54_RS02280 (ETT54_02275) rnc 429410..430102 (+) 693 WP_002990670.1 ribonuclease III -
  ETT54_RS02285 (ETT54_02280) smc 430103..433642 (+) 3540 WP_136098105.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=341965 ETT54_RS02275 WP_002985641.1 428158..428967(+) (vicX) [Streptococcus pyogenes strain emm92]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=341965 ETT54_RS02275 WP_002985641.1 428158..428967(+) (vicX) [Streptococcus pyogenes strain emm92]
ATGAATGAGAGTGGTTTTAAATACAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment