Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT55_RS08375 Genome accession   NZ_CP035444
Coordinates   1681819..1682532 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain emm90.5     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1676819..1687532
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT55_RS08365 (ETT55_08355) treC 1677888..1679516 (-) 1629 WP_111718022.1 alpha,alpha-phosphotrehalase -
  ETT55_RS08370 (ETT55_08360) treP 1679584..1681608 (-) 2025 WP_111718023.1 PTS system trehalose-specific EIIBC component -
  ETT55_RS08375 (ETT55_08365) treR 1681819..1682532 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  ETT55_RS08385 (ETT55_08375) - 1682811..1683149 (-) 339 Protein_1549 winged helix-turn-helix transcriptional regulator -
  ETT55_RS08390 (ETT55_08380) - 1683335..1684192 (+) 858 WP_111711508.1 VOC family protein -
  ETT55_RS08395 (ETT55_08385) yaaA 1684234..1684965 (+) 732 WP_111718025.1 peroxide stress protein YaaA -
  ETT55_RS08400 (ETT55_08390) nrdG 1685139..1685753 (-) 615 WP_021775544.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT55_RS08405 (ETT55_08395) - 1685768..1686262 (-) 495 WP_136021698.1 GNAT family N-acetyltransferase -
  ETT55_RS08410 (ETT55_08400) - 1686271..1687206 (-) 936 WP_136021699.1 Gfo/Idh/MocA family protein -
  ETT55_RS08850 - 1687235..1687381 (-) 147 WP_030126184.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=341935 ETT55_RS08375 WP_002982243.1 1681819..1682532(+) (treR) [Streptococcus pyogenes strain emm90.5]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=341935 ETT55_RS08375 WP_002982243.1 1681819..1682532(+) (treR) [Streptococcus pyogenes strain emm90.5]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTCGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment