Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ETT55_RS06840 Genome accession   NZ_CP035444
Coordinates   1353736..1354461 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain emm90.5     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1348736..1359461
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT55_RS06805 (ETT55_06795) - 1348770..1349066 (-) 297 WP_002983486.1 YlxR family protein -
  ETT55_RS06810 (ETT55_06800) nusA 1349082..1350239 (-) 1158 WP_023611711.1 transcription termination factor NusA -
  ETT55_RS06815 (ETT55_06805) rimP 1350414..1350950 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT55_RS06825 (ETT55_06815) trmB 1351209..1351844 (-) 636 WP_011018101.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT55_RS06830 (ETT55_06820) ccrZ 1351844..1352635 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT55_RS06835 (ETT55_06825) - 1352699..1353733 (-) 1035 WP_030126324.1 ABC transporter permease -
  ETT55_RS06840 (ETT55_06830) pptA 1353736..1354461 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ETT55_RS06845 (ETT55_06835) - 1354533..1354952 (+) 420 WP_002983376.1 HIT family protein -
  ETT55_RS06850 (ETT55_06840) - 1354949..1355305 (+) 357 WP_030126323.1 hypothetical protein -
  ETT55_RS06855 (ETT55_06845) - 1355416..1356699 (-) 1284 WP_030126322.1 LCP family protein -
  ETT55_RS06860 (ETT55_06850) - 1356708..1357232 (-) 525 WP_030126321.1 GNAT family N-acetyltransferase -
  ETT55_RS06865 (ETT55_06855) tsaE 1357207..1357668 (-) 462 WP_030126320.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ETT55_RS06870 (ETT55_06860) - 1357822..1359282 (-) 1461 WP_030126319.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=341929 ETT55_RS06840 WP_002983379.1 1353736..1354461(-) (pptA) [Streptococcus pyogenes strain emm90.5]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=341929 ETT55_RS06840 WP_002983379.1 1353736..1354461(-) (pptA) [Streptococcus pyogenes strain emm90.5]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment