Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ETT55_RS02535 Genome accession   NZ_CP035444
Coordinates   463462..464271 (+) Length   269 a.a.
NCBI ID   WP_136021674.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm90.5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 458462..469271
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT55_RS02515 (ETT55_02510) - 458904..460151 (+) 1248 Protein_430 AMP-binding protein -
  ETT55_RS02520 (ETT55_02515) - 460207..461241 (+) 1035 WP_175393123.1 DUF3114 domain-containing protein -
  ETT55_RS02525 (ETT55_02520) vicR 461403..462113 (+) 711 WP_002985645.1 response regulator YycF Regulator
  ETT55_RS02530 (ETT55_02525) vicK 462106..463458 (+) 1353 WP_023078748.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ETT55_RS02535 (ETT55_02530) vicX 463462..464271 (+) 810 WP_136021674.1 MBL fold metallo-hydrolase Regulator
  ETT55_RS02540 (ETT55_02535) rnc 464714..465406 (+) 693 WP_002990670.1 ribonuclease III -
  ETT55_RS02545 (ETT55_02540) smc 465407..468946 (+) 3540 WP_136021673.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30081.18 Da        Isoelectric Point: 5.5314

>NTDB_id=341913 ETT55_RS02535 WP_136021674.1 463462..464271(+) (vicX) [Streptococcus pyogenes strain emm90.5]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFSVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=341913 ETT55_RS02535 WP_136021674.1 463462..464271(+) (vicX) [Streptococcus pyogenes strain emm90.5]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTTCGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment