Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ETT56_RS09980 Genome accession   NZ_CP035443
Coordinates   54251..54346 (+) Length   31 a.a.
NCBI ID   WP_198462994.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm58     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 49251..59346
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT56_RS00320 (ETT56_00320) - 50115..51812 (+) 1698 WP_063632921.1 AIPR family protein -
  ETT56_RS00325 (ETT56_00325) purB 51830..53122 (+) 1293 WP_023079043.1 adenylosuccinate lyase -
  ETT56_RS00330 (ETT56_00330) comR 53256..54167 (+) 912 WP_002986681.1 transcriptional regulator Rgg4/ComR Regulator
  ETT56_RS09980 comS 54251..54346 (+) 96 WP_198462994.1 quorum-sensing system DWW-type pheromone Regulator
  ETT56_RS00335 (ETT56_00335) ruvB 54393..55391 (+) 999 WP_014407198.1 Holliday junction branch migration DNA helicase RuvB -
  ETT56_RS00340 (ETT56_00340) - 55529..55966 (+) 438 WP_023079047.1 low molecular weight protein-tyrosine-phosphatase -
  ETT56_RS00345 (ETT56_00345) - 55989..56390 (+) 402 WP_032465955.1 MORN repeat-containing protein -
  ETT56_RS00350 (ETT56_00350) - 56387..58162 (+) 1776 WP_023610835.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 31 a.a.        Molecular weight: 3857.66 Da        Isoelectric Point: 10.0436

>NTDB_id=341886 ETT56_RS09980 WP_198462994.1 54251..54346(+) (comS) [Streptococcus pyogenes strain emm58]
MLKKYKYYFIFAALLSFKVVQELSAVDWWRL

Nucleotide


Download         Length: 96 bp        

>NTDB_id=341886 ETT56_RS09980 WP_198462994.1 54251..54346(+) (comS) [Streptococcus pyogenes strain emm58]
ATGTTAAAAAAGTATAAGTACTATTTTATATTCGCAGCTCTACTATCTTTTAAAGTAGTTCAAGAGCTTAGTGCTGTTGA
CTGGTGGCGATTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

100

100

1
  comS Streptococcus pyogenes MGAS315

45.161

100

0.452

Multiple sequence alignment