Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ETT57_RS09485 Genome accession   NZ_CP035442
Coordinates   54154..54252 (+) Length   32 a.a.
NCBI ID   WP_020833188.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm25     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 49154..59252
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT57_RS00325 (ETT57_00325) - 50076..51557 (+) 1482 WP_009880316.1 PIN-like domain-containing protein -
  ETT57_RS00330 (ETT57_00330) purB 51730..53022 (+) 1293 WP_136048822.1 adenylosuccinate lyase -
  ETT57_RS00335 (ETT57_00335) - 53153..54063 (+) 911 Protein_32 helix-turn-helix domain-containing protein -
  ETT57_RS09485 comS 54154..54252 (+) 99 WP_020833188.1 quorum-sensing system DWW-type pheromone Regulator
  ETT57_RS00340 (ETT57_00340) ruvB 54283..55281 (+) 999 WP_014407198.1 Holliday junction branch migration DNA helicase RuvB -
  ETT57_RS00345 (ETT57_00345) - 55419..55856 (+) 438 WP_002994668.1 low molecular weight protein-tyrosine-phosphatase -
  ETT57_RS00350 (ETT57_00350) - 55879..56280 (+) 402 WP_012560369.1 MORN repeat-containing protein -
  ETT57_RS00355 (ETT57_00355) - 56277..58052 (+) 1776 WP_136048824.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 32 a.a.        Molecular weight: 3758.63 Da        Isoelectric Point: 10.7919

>NTDB_id=341832 ETT57_RS09485 WP_020833188.1 54154..54252(+) (comS) [Streptococcus pyogenes strain emm25]
MLKKVKPFLLLAAVVAFKVARVMHEFDWWNLG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=341832 ETT57_RS09485 WP_020833188.1 54154..54252(+) (comS) [Streptococcus pyogenes strain emm25]
ATGTTAAAAAAAGTTAAGCCATTTTTACTATTAGCCGCAGTAGTTGCATTTAAAGTTGCTCGTGTAATGCATGAATTTGA
TTGGTGGAATCTTGGTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS315

100

100

1
  comS Streptococcus pyogenes MGAS8232

45.161

96.875

0.437

Multiple sequence alignment