Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | F7D06_RS25345 | Genome accession | NZ_CP044311 |
| Coordinates | 5159086..5159526 (-) | Length | 146 a.a. |
| NCBI ID | WP_000360902.1 | Uniprot ID | A7ZHJ7 |
| Organism | Escherichia coli strain RM13752 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 5154086..5164526
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7D06_RS25325 (F7D06_25790) | coaE | 5154576..5155196 (-) | 621 | WP_001269520.1 | dephospho-CoA kinase | - |
| F7D06_RS26505 | - | 5155221..5155265 (+) | 45 | WP_120795372.1 | protein YacM | - |
| F7D06_RS25330 (F7D06_25795) | guaC | 5155421..5156464 (+) | 1044 | WP_001217338.1 | GMP reductase | - |
| F7D06_RS25335 (F7D06_25800) | hofC | 5156499..5157701 (-) | 1203 | WP_050938953.1 | protein transport protein HofC | - |
| F7D06_RS25340 (F7D06_25805) | pilB | 5157691..5159076 (-) | 1386 | WP_050938954.1 | type II secretion system protein GspE | Machinery gene |
| F7D06_RS25345 (F7D06_25810) | pilA | 5159086..5159526 (-) | 441 | WP_000360902.1 | prepilin peptidase-dependent pilin | Machinery gene |
| F7D06_RS25350 (F7D06_25815) | nadC | 5159729..5160622 (-) | 894 | WP_001135174.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| F7D06_RS25355 (F7D06_25820) | ampD | 5160710..5161261 (+) | 552 | WP_000923721.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| F7D06_RS25360 (F7D06_25825) | ampE | 5161258..5162112 (+) | 855 | WP_000172006.1 | beta-lactamase regulator AmpE | - |
| F7D06_RS25365 (F7D06_25830) | aroP | 5162155..5163528 (-) | 1374 | WP_000969914.1 | aromatic amino acid transporter AroP | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15630.76 Da Isoelectric Point: 4.5559
>NTDB_id=341826 F7D06_RS25345 WP_000360902.1 5159086..5159526(-) (pilA) [Escherichia coli strain RM13752]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALHQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALHQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=341826 F7D06_RS25345 WP_000360902.1 5159086..5159526(-) (pilA) [Escherichia coli strain RM13752]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCATC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCATC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
41.791 |
91.781 |
0.384 |
| pilA | Haemophilus influenzae Rd KW20 |
41.045 |
91.781 |
0.377 |