Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ETT57_RS07270 Genome accession   NZ_CP035442
Coordinates   1401308..1402033 (-) Length   241 a.a.
NCBI ID   WP_136048740.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm25     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1396308..1407033
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT57_RS07235 (ETT57_07225) - 1396342..1396638 (-) 297 WP_002983486.1 YlxR family protein -
  ETT57_RS07240 (ETT57_07230) nusA 1396654..1397811 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  ETT57_RS07245 (ETT57_07235) rimP 1397986..1398522 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT57_RS07255 (ETT57_07245) trmB 1398781..1399416 (-) 636 WP_136048739.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT57_RS07260 (ETT57_07250) ccrZ 1399416..1400207 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT57_RS07265 (ETT57_07255) - 1400271..1401305 (-) 1035 WP_002994331.1 ABC transporter permease -
  ETT57_RS07270 (ETT57_07260) pptA 1401308..1402033 (-) 726 WP_136048740.1 ABC transporter ATP-binding protein Regulator
  ETT57_RS07275 (ETT57_07265) - 1402105..1402524 (+) 420 WP_002983376.1 HIT family protein -
  ETT57_RS07280 (ETT57_07270) - 1402521..1402877 (+) 357 WP_009880754.1 hypothetical protein -
  ETT57_RS07285 (ETT57_07275) - 1402988..1404271 (-) 1284 WP_136048741.1 LCP family protein -
  ETT57_RS07290 (ETT57_07280) - 1404280..1404804 (-) 525 WP_111704937.1 GNAT family N-acetyltransferase -
  ETT57_RS07295 (ETT57_07285) tsaE 1404779..1405240 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ETT57_RS07300 (ETT57_07290) - 1405394..1406854 (-) 1461 WP_023609915.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26677.76 Da        Isoelectric Point: 4.6316

>NTDB_id=341822 ETT57_RS07270 WP_136048740.1 1401308..1402033(-) (pptA) [Streptococcus pyogenes strain emm25]
MLNIKNLTGGYHNIPVLNDVSFSVNNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=341822 ETT57_RS07270 WP_136048740.1 1401308..1402033(-) (pptA) [Streptococcus pyogenes strain emm25]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAAACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGATCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment