Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT59_RS08455 Genome accession   NZ_CP035440
Coordinates   1693828..1694541 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain emm124     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1688828..1699541
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT59_RS08445 (ETT59_08440) treC 1689898..1691526 (-) 1629 WP_002991331.1 alpha,alpha-phosphotrehalase -
  ETT59_RS08450 (ETT59_08445) treP 1691593..1693617 (-) 2025 WP_003059974.1 PTS system trehalose-specific EIIBC component -
  ETT59_RS08455 (ETT59_08450) treR 1693828..1694541 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  ETT59_RS08465 (ETT59_08460) - 1694820..1695157 (-) 338 Protein_1556 winged helix-turn-helix transcriptional regulator -
  ETT59_RS08470 (ETT59_08465) - 1695344..1696201 (+) 858 WP_053308671.1 VOC family protein -
  ETT59_RS08475 (ETT59_08470) yaaA 1696243..1696974 (+) 732 WP_012561068.1 peroxide stress protein YaaA -
  ETT59_RS08480 (ETT59_08475) nrdG 1697148..1697762 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT59_RS08485 (ETT59_08480) - 1697762..1698271 (-) 510 WP_011018311.1 GNAT family N-acetyltransferase -
  ETT59_RS08490 (ETT59_08485) - 1698280..1699215 (-) 936 WP_063632177.1 Gfo/Idh/MocA family protein -
  ETT59_RS09070 - 1699244..1699390 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=341718 ETT59_RS08455 WP_002982243.1 1693828..1694541(+) (treR) [Streptococcus pyogenes strain emm124]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=341718 ETT59_RS08455 WP_002982243.1 1693828..1694541(+) (treR) [Streptococcus pyogenes strain emm124]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAGTACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACTAAGGCAG
GCCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGCTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTCGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGACGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment