Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ETT59_RS03170 Genome accession   NZ_CP035440
Coordinates   605875..606912 (+) Length   345 a.a.
NCBI ID   WP_111684731.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm124     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 600875..611912
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT59_RS03145 (ETT59_03145) - 601139..602470 (+) 1332 WP_032460502.1 dipeptidase -
  ETT59_RS03150 (ETT59_03150) arcC 602490..603440 (+) 951 WP_136276429.1 carbamate kinase -
  ETT59_RS03155 (ETT59_03155) asnA 603753..604745 (+) 993 WP_023611792.1 aspartate--ammonia ligase -
  ETT59_RS03160 (ETT59_03160) rsmD 604868..605407 (+) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ETT59_RS03165 (ETT59_03165) coaD 605397..605888 (+) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  ETT59_RS03170 (ETT59_03170) sepM 605875..606912 (+) 1038 WP_111684731.1 SepM family pheromone-processing serine protease Regulator
  ETT59_RS03175 (ETT59_03175) - 607317..608294 (+) 978 WP_002994809.1 LacI family DNA-binding transcriptional regulator -
  ETT59_RS03180 (ETT59_03180) - 608742..609362 (+) 621 WP_002992791.1 YutD family protein -
  ETT59_RS03185 (ETT59_03185) rlmN 609366..610445 (+) 1080 WP_002992788.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ETT59_RS03190 (ETT59_03190) - 610527..611153 (-) 627 WP_002983834.1 A24 family peptidase -
  ETT59_RS03195 (ETT59_03195) - 611381..611908 (+) 528 WP_002983837.1 Dps family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37571.27 Da        Isoelectric Point: 9.6692

>NTDB_id=341696 ETT59_RS03170 WP_111684731.1 605875..606912(+) (sepM) [Streptococcus pyogenes strain emm124]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTIQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRS
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=341696 ETT59_RS03170 WP_111684731.1 605875..606912(+) (sepM) [Streptococcus pyogenes strain emm124]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCTCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGCAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGATTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCCAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGTCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

68.696

100

0.687


Multiple sequence alignment