Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT61_RS09530 Genome accession   NZ_CP035438
Coordinates   1853942..1854655 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain emm22.8     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1848942..1859655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT61_RS09520 (ETT61_09510) treC 1850013..1851641 (-) 1629 WP_136020120.1 alpha,alpha-phosphotrehalase -
  ETT61_RS09525 (ETT61_09515) treP 1851708..1853732 (-) 2025 WP_032465298.1 PTS system trehalose-specific EIIBC component -
  ETT61_RS09530 (ETT61_09520) treR 1853942..1854655 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  ETT61_RS09540 (ETT61_09530) - 1854934..1855265 (-) 332 Protein_1767 winged helix-turn-helix transcriptional regulator -
  ETT61_RS09545 (ETT61_09535) - 1855452..1856309 (+) 858 WP_032459979.1 VOC family protein -
  ETT61_RS09550 (ETT61_09540) yaaA 1856351..1857082 (+) 732 WP_012561068.1 peroxide stress protein YaaA -
  ETT61_RS09555 (ETT61_09545) nrdG 1857256..1857870 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT61_RS09560 (ETT61_09550) - 1857870..1858379 (-) 510 WP_136020119.1 GNAT family N-acetyltransferase -
  ETT61_RS09565 (ETT61_09555) - 1858388..1859323 (-) 936 WP_136020118.1 Gfo/Idh/MocA family protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=341610 ETT61_RS09530 WP_002982243.1 1853942..1854655(+) (treR) [Streptococcus pyogenes strain emm22.8]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=341610 ETT61_RS09530 WP_002982243.1 1853942..1854655(+) (treR) [Streptococcus pyogenes strain emm22.8]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment