Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | ETT62_RS00695 | Genome accession | NZ_CP035437 |
| Coordinates | 105705..106658 (+) | Length | 317 a.a. |
| NCBI ID | WP_136121096.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain emm78.3 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 100705..111658
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETT62_RS00655 (ETT62_00655) | - | 101532..101897 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| ETT62_RS00660 (ETT62_00660) | comYA | 101990..102928 (+) | 939 | WP_136121098.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ETT62_RS00665 (ETT62_00665) | comYB | 102864..103898 (+) | 1035 | WP_227878200.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ETT62_RS00670 (ETT62_00670) | comYC | 103900..104226 (+) | 327 | WP_002986552.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ETT62_RS00675 (ETT62_00675) | comGD | 104201..104629 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | - |
| ETT62_RS00680 (ETT62_00680) | comGE | 104586..104870 (+) | 285 | WP_011284422.1 | competence type IV pilus minor pilin ComGE | - |
| ETT62_RS00685 (ETT62_00685) | comYF | 104863..105297 (+) | 435 | WP_002992738.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ETT62_RS00690 (ETT62_00690) | comGG | 105281..105607 (+) | 327 | WP_009880358.1 | competence type IV pilus minor pilin ComGG | - |
| ETT62_RS00695 (ETT62_00695) | comYH | 105705..106658 (+) | 954 | WP_136121096.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ETT62_RS00700 (ETT62_00700) | - | 106717..107913 (+) | 1197 | WP_136121095.1 | acetate kinase | - |
| ETT62_RS00705 (ETT62_00705) | - | 108100..108408 (+) | 309 | WP_011284425.1 | hypothetical protein | - |
| ETT62_RS00710 (ETT62_00710) | proC | 108491..109261 (-) | 771 | WP_011284426.1 | pyrroline-5-carboxylate reductase | - |
| ETT62_RS00715 (ETT62_00715) | pepA | 109309..110376 (-) | 1068 | WP_023610097.1 | glutamyl aminopeptidase | - |
| ETT62_RS00725 (ETT62_00725) | - | 110841..111125 (+) | 285 | WP_002992749.1 | DUF4651 domain-containing protein | - |
| ETT62_RS00730 (ETT62_00730) | - | 111122..111439 (+) | 318 | WP_011528167.1 | thioredoxin family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36017.09 Da Isoelectric Point: 4.6528
>NTDB_id=341518 ETT62_RS00695 WP_136121096.1 105705..106658(+) (comYH) [Streptococcus pyogenes strain emm78.3]
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQMVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWQLSNVN
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQMVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWQLSNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=341518 ETT62_RS00695 WP_136121096.1 105705..106658(+) (comYH) [Streptococcus pyogenes strain emm78.3]
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAGATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACCTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGATGGTGGCCTTGATTACGCTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGCAACTGAGTAATGTCAATTAA
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAGATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACCTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGATGGTGGCCTTGATTACGCTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGCAACTGAGTAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
65.823 |
99.685 |
0.656 |
| comYH | Streptococcus mutans UA140 |
65.506 |
99.685 |
0.653 |