Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT64_RS08740 Genome accession   NZ_CP035435
Coordinates   1695358..1696071 (+) Length   237 a.a.
NCBI ID   WP_136293036.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm64.3     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1690358..1701071
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT64_RS08730 (ETT64_08725) treC 1691428..1693056 (-) 1629 WP_136293033.1 alpha,alpha-phosphotrehalase -
  ETT64_RS08735 (ETT64_08730) treP 1693123..1695147 (-) 2025 WP_136293035.1 PTS system trehalose-specific EIIBC component -
  ETT64_RS08740 (ETT64_08735) treR 1695358..1696071 (+) 714 WP_136293036.1 trehalose operon repressor Regulator
  ETT64_RS08750 (ETT64_08745) - 1696351..1696688 (-) 338 Protein_1618 winged helix-turn-helix transcriptional regulator -
  ETT64_RS08755 (ETT64_08750) - 1696875..1697732 (+) 858 WP_023610268.1 VOC family protein -
  ETT64_RS08760 (ETT64_08755) yaaA 1697774..1698505 (+) 732 WP_023079177.1 peroxide stress protein YaaA -
  ETT64_RS08765 (ETT64_08760) nrdG 1698679..1699293 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT64_RS08770 (ETT64_08765) - 1699293..1699802 (-) 510 WP_011285262.1 GNAT family N-acetyltransferase -
  ETT64_RS08775 (ETT64_08770) - 1699811..1700746 (-) 936 WP_010922750.1 Gfo/Idh/MocA family protein -
  ETT64_RS09230 - 1700775..1700921 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27608.74 Da        Isoelectric Point: 9.6307

>NTDB_id=341453 ETT64_RS08740 WP_136293036.1 1695358..1696071(+) (treR) [Streptococcus pyogenes strain emm64.3]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDTDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=341453 ETT64_RS08740 WP_136293036.1 1695358..1696071(+) (treR) [Streptococcus pyogenes strain emm64.3]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACACTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(91-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment