Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ETT64_RS06960 Genome accession   NZ_CP035435
Coordinates   1344435..1345244 (-) Length   269 a.a.
NCBI ID   WP_023612763.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm64.3     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1339435..1350244
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT64_RS06950 (ETT64_06950) smc 1339760..1343299 (-) 3540 WP_111674523.1 chromosome segregation protein SMC -
  ETT64_RS06955 (ETT64_06955) rnc 1343300..1343992 (-) 693 WP_002990670.1 ribonuclease III -
  ETT64_RS06960 (ETT64_06960) vicX 1344435..1345244 (-) 810 WP_023612763.1 MBL fold metallo-hydrolase Regulator
  ETT64_RS06965 (ETT64_06965) vicK 1345248..1346600 (-) 1353 WP_002995609.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ETT64_RS06970 (ETT64_06970) vicR 1346593..1347303 (-) 711 WP_002985645.1 response regulator YycF Regulator
  ETT64_RS06975 (ETT64_06975) - 1347465..1348499 (-) 1035 WP_162472284.1 DUF3114 domain-containing protein -
  ETT64_RS06980 (ETT64_06980) - 1348555..1349802 (-) 1248 WP_136262547.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30081.18 Da        Isoelectric Point: 5.5314

>NTDB_id=341443 ETT64_RS06960 WP_023612763.1 1344435..1345244(-) (vicX) [Streptococcus pyogenes strain emm64.3]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=341443 ETT64_RS06960 WP_023612763.1 1344435..1345244(-) (vicX) [Streptococcus pyogenes strain emm64.3]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
GTCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762

Multiple sequence alignment