Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT66_RS08570 Genome accession   NZ_CP035433
Coordinates   1708630..1709343 (+) Length   237 a.a.
NCBI ID   WP_002992823.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm65     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1703630..1714343
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT66_RS08560 (ETT66_08555) treC 1704700..1706328 (-) 1629 WP_023079166.1 alpha,alpha-phosphotrehalase -
  ETT66_RS08565 (ETT66_08560) treP 1706395..1708419 (-) 2025 WP_136286389.1 PTS system trehalose-specific EIIBC component -
  ETT66_RS08570 (ETT66_08565) treR 1708630..1709343 (+) 714 WP_002992823.1 trehalose operon repressor Regulator
  ETT66_RS08580 (ETT66_08575) - 1709621..1709959 (-) 339 WP_136269543.1 helix-turn-helix domain-containing protein -
  ETT66_RS08585 (ETT66_08580) - 1710146..1711003 (+) 858 WP_111688369.1 VOC family protein -
  ETT66_RS08590 (ETT66_08585) yaaA 1711045..1711776 (+) 732 WP_136286387.1 peroxide stress protein YaaA -
  ETT66_RS08595 (ETT66_08590) nrdG 1711950..1712564 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT66_RS08600 (ETT66_08595) - 1712579..1713073 (-) 495 WP_014407930.1 GNAT family N-acetyltransferase -
  ETT66_RS08605 (ETT66_08600) - 1713082..1714017 (-) 936 WP_136286385.1 Gfo/Idh/MocA family protein -
  ETT66_RS09035 - 1714046..1714192 (-) 147 WP_023610752.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27620.79 Da        Isoelectric Point: 9.6307

>NTDB_id=341344 ETT66_RS08570 WP_002992823.1 1708630..1709343(+) (treR) [Streptococcus pyogenes strain emm65]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=341344 ETT66_RS08570 WP_002992823.1 1708630..1709343(+) (treR) [Streptococcus pyogenes strain emm65]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTAGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675

Multiple sequence alignment