Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ETT67_RS07200 Genome accession   NZ_CP035432
Coordinates   1403366..1404091 (-) Length   241 a.a.
NCBI ID   WP_023078675.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm11     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1398366..1409091
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT67_RS07165 (ETT67_07155) - 1398400..1398696 (-) 297 WP_002983486.1 YlxR family protein -
  ETT67_RS07170 (ETT67_07160) nusA 1398712..1399869 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  ETT67_RS07175 (ETT67_07165) rimP 1400044..1400580 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT67_RS07185 (ETT67_07175) trmB 1400839..1401474 (-) 636 WP_023078685.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT67_RS07190 (ETT67_07180) ccrZ 1401474..1402265 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT67_RS07195 (ETT67_07185) - 1402329..1403363 (-) 1035 WP_023078705.1 ABC transporter permease -
  ETT67_RS07200 (ETT67_07190) pptA 1403366..1404091 (-) 726 WP_023078675.1 ABC transporter ATP-binding protein Regulator
  ETT67_RS07205 (ETT67_07195) - 1404163..1404582 (+) 420 WP_002983376.1 HIT family protein -
  ETT67_RS07210 (ETT67_07200) - 1404579..1404935 (+) 357 WP_009880754.1 hypothetical protein -
  ETT67_RS07215 (ETT67_07205) - 1405046..1406320 (-) 1275 WP_020837594.1 LCP family protein -
  ETT67_RS07220 (ETT67_07210) - 1406329..1406853 (-) 525 WP_023078656.1 GNAT family N-acetyltransferase -
  ETT67_RS07225 (ETT67_07215) tsaE 1406828..1407289 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ETT67_RS07230 (ETT67_07220) - 1407443..1408903 (-) 1461 WP_023079950.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26706.80 Da        Isoelectric Point: 4.5624

>NTDB_id=341287 ETT67_RS07200 WP_023078675.1 1403366..1404091(-) (pptA) [Streptococcus pyogenes strain emm11]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEVFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=341287 ETT67_RS07200 WP_023078675.1 1403366..1404091(-) (pptA) [Streptococcus pyogenes strain emm11]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGCTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGTTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment