Detailed information NTG0341283

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: F4V31_RS08535
• Genome accession: NZ_CP044162
• Coordinates: 1634956..1635915 (+)
• Length: 319 a.a.
• NCBI ID: WP_002927706.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain AR-0419
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1629956..1640915

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F4V31_RS08510	-	1630290..1631312 (-)	1023	WP_150967484.1	hypothetical protein	-
F4V31_RS08515	-	1631383..1632156 (+)	774	WP_002866160.1	glycosyltransferase family 25 protein	-
F4V31_RS08520	wlaTB	1632149..1633105 (+)	957	WP_002860237.1	class E lipooligosaccharide biosynthesis protein WlaTB	-
F4V31_RS08525	wlaTC	1633102..1634061 (+)	960	WP_002927702.1	class E lipooligosaccharide biosynthesis protein WlaTC	-
F4V31_RS08530	-	1634064..1634897 (-)	834	WP_002927704.1	glycosyltransferase family 2 protein	-
F4V31_RS08535	waaF	1634956..1635915 (+)	960	WP_002927706.1	lipopolysaccharide heptosyltransferase II	Regulator
F4V31_RS08540	gmhA	1635896..1636456 (-)	561	WP_002787744.1	D-sedoheptulose 7-phosphate isomerase	-
F4V31_RS08545	rfaE1	1636453..1637838 (-)	1386	WP_002927708.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
F4V31_RS08550	rfaD	1637831..1638784 (-)	954	WP_002873533.1	ADP-glyceromanno-heptose 6-epimerase	-
F4V31_RS08555	gmhB	1638785..1639345 (-)	561	WP_002927709.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
F4V31_RS08560	-	1639427..1639729 (+)	303	WP_002852762.1	cytochrome c	-
F4V31_RS08565	ccoS	1639752..1639958 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36906.42 Da
• Isoelectric Point: 10.3311

>NTDB_id=341283 F4V31_RS08535 WP_002927706.1 1634956..1635915(+) (waaF) [Campylobacter jejuni strain AR-0419]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELDKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGTGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWVHLNLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=341283 F4V31_RS08535 WP_002927706.1 1634956..1635915(+) (waaF) [Campylobacter jejuni strain AR-0419]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGACAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTACAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAGATGGGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	93.417	100	0.934