Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   ETT67_RS01430 Genome accession   NZ_CP035432
Coordinates   263389..264459 (+) Length   356 a.a.
NCBI ID   WP_136059366.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm11     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 258389..269459
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT67_RS01415 (ETT67_01415) amiA 258917..260887 (+) 1971 WP_023079331.1 peptide ABC transporter substrate-binding protein Regulator
  ETT67_RS01420 (ETT67_01420) amiC 260952..262454 (+) 1503 WP_002992227.1 ABC transporter permease Regulator
  ETT67_RS01425 (ETT67_01425) amiD 262454..263380 (+) 927 WP_023079327.1 oligopeptide ABC transporter permease OppC Regulator
  ETT67_RS01430 (ETT67_01430) amiE 263389..264459 (+) 1071 WP_136059366.1 ABC transporter ATP-binding protein Regulator
  ETT67_RS01435 (ETT67_01435) amiF 264452..265375 (+) 924 WP_002986000.1 ABC transporter ATP-binding protein Regulator
  ETT67_RS09480 - 265360..265503 (-) 144 WP_366652599.1 IS3 family transposase -
  ETT67_RS01440 (ETT67_01440) - 265524..265763 (-) 240 WP_023077809.1 hypothetical protein -

Sequence

Protein


Download         Length: 356 a.a.        Molecular weight: 39650.73 Da        Isoelectric Point: 5.4602

>NTDB_id=341260 ETT67_RS01430 WP_136059366.1 263389..264459(+) (amiE) [Streptococcus pyogenes strain emm11]
MTKENNVILTAKDVVVEFDVRDRVLTAIRNVSLELVEGEVLAFVGESGSGKSVLTKTFTGMLESNGRIANGSIVYRGQEL
TDLKTNKEWAKIRGSKIATIFQDPMTSLSPIKTIGSQITEVIIKHQKVSHAKAKEMALDYMNKVGIPNAKKRFEDYPFEY
SGGMRQRIVIAIALACCPDILICDEPTTALDVTIQAQIVELLKSLQREYHFTIIFITHDLGVVASIADKVAVMYAGEIVE
FGTVEEIFYDPRHPYTWSLLSSLPQLADESGELYAIPGTPPSLYSPIIGDAFALRSEYAMVLDFEKAPPAINVSETHWAK
TWLLHPEAPKVQKPEVIQDLHQKILRKMSQQEEGNV

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=341260 ETT67_RS01430 WP_136059366.1 263389..264459(+) (amiE) [Streptococcus pyogenes strain emm11]
ATGACAAAAGAAAATAATGTAATCTTAACTGCCAAAGATGTGGTGGTAGAATTTGATGTGCGTGATCGTGTTTTAACAGC
TATCCGTAACGTCTCACTGGAACTTGTTGAAGGAGAAGTCCTTGCTTTTGTAGGGGAATCAGGCTCAGGTAAATCTGTTT
TAACAAAGACCTTTACAGGGATGTTGGAGTCTAATGGACGCATTGCTAATGGTTCAATTGTCTATCGTGGGCAAGAATTG
ACAGATTTAAAAACAAATAAAGAGTGGGCAAAGATTCGCGGCTCAAAAATCGCAACGATTTTCCAAGACCCAATGACCAG
TCTTAGTCCCATTAAAACTATCGGTAGCCAAATCACAGAAGTGATTATTAAGCACCAAAAAGTAAGTCATGCCAAAGCTA
AAGAAATGGCCCTTGATTACATGAATAAAGTGGGTATCCCAAATGCCAAAAAACGCTTTGAAGATTACCCATTTGAGTAT
TCAGGAGGAATGCGTCAACGTATTGTTATCGCTATTGCTTTAGCTTGTTGCCCAGATATTCTTATCTGTGATGAGCCAAC
AACAGCCCTTGATGTGACTATTCAAGCTCAAATCGTTGAGTTATTGAAGTCGCTTCAACGAGAATATCATTTCACTATTA
TCTTTATTACGCACGATTTAGGTGTTGTGGCAAGCATTGCAGATAAAGTGGCTGTCATGTATGCAGGAGAAATTGTTGAA
TTTGGAACAGTCGAAGAGATTTTCTATGATCCAAGACACCCCTATACATGGAGTTTGCTGTCTAGCTTACCGCAGTTGGC
AGATGAATCTGGTGAACTTTACGCTATTCCAGGAACGCCTCCATCACTTTATTCACCAATTATCGGAGATGCCTTTGCAC
TTCGCTCAGAATATGCTATGGTTTTAGACTTTGAAAAAGCACCTCCGGCGATTAACGTATCTGAGACTCATTGGGCCAAA
ACATGGCTTTTACACCCAGAGGCTCCAAAAGTTCAAAAACCAGAAGTCATTCAAGATTTGCATCAAAAAATCTTAAGGAA
AATGTCACAACAGGAGGAAGGAAATGTCTGA

Domains

Predicted by InterproScan.

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(239-299)

ABC transporter (ABC_tran)

(29-187)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

76.389

100

0.772
  amiE Streptococcus thermophilus LMG 18311

75.278

100

0.761
  amiE Streptococcus thermophilus LMD-9

75.278

100

0.761
  oppD Streptococcus mutans UA159

56.677

94.663

0.537

Multiple sequence alignment