Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ETT68_RS06210 Genome accession   NZ_CP035431
Coordinates   1223430..1224467 (-) Length   345 a.a.
NCBI ID   WP_111684731.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm105     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1218430..1229467
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT68_RS06185 (ETT68_06180) - 1218434..1218961 (-) 528 WP_002983837.1 Dps family protein -
  ETT68_RS06190 (ETT68_06185) - 1219189..1219815 (+) 627 WP_002983834.1 A24 family peptidase -
  ETT68_RS06195 (ETT68_06190) rlmN 1219897..1220976 (-) 1080 WP_109991722.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ETT68_RS06200 (ETT68_06195) - 1220980..1221600 (-) 621 WP_002992791.1 YutD family protein -
  ETT68_RS06205 (ETT68_06200) - 1222048..1223025 (-) 978 WP_109991723.1 LacI family DNA-binding transcriptional regulator -
  ETT68_RS06210 (ETT68_06205) sepM 1223430..1224467 (-) 1038 WP_111684731.1 SepM family pheromone-processing serine protease Regulator
  ETT68_RS06215 (ETT68_06210) coaD 1224454..1224945 (-) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  ETT68_RS06220 (ETT68_06215) rsmD 1224935..1225474 (-) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ETT68_RS06225 (ETT68_06220) asnA 1225597..1226589 (-) 993 WP_023611792.1 aspartate--ammonia ligase -
  ETT68_RS06230 (ETT68_06225) arcC 1226902..1227852 (-) 951 WP_010922501.1 carbamate kinase -
  ETT68_RS06235 (ETT68_06230) - 1227872..1229203 (-) 1332 WP_032460502.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37571.27 Da        Isoelectric Point: 9.6692

>NTDB_id=341231 ETT68_RS06210 WP_111684731.1 1223430..1224467(-) (sepM) [Streptococcus pyogenes strain emm105]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTIQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRS
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=341231 ETT68_RS06210 WP_111684731.1 1223430..1224467(-) (sepM) [Streptococcus pyogenes strain emm105]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCTCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGCAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGATTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCCAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGTCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

68.696

100

0.687


Multiple sequence alignment