Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   ETT68_RS01460 Genome accession   NZ_CP035431
Coordinates   268519..269589 (+) Length   356 a.a.
NCBI ID   WP_136275660.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm105     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 263519..274589
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT68_RS01445 (ETT68_01445) amiA 264047..266017 (+) 1971 WP_136109480.1 peptide ABC transporter substrate-binding protein Regulator
  ETT68_RS01450 (ETT68_01450) amiC 266082..267584 (+) 1503 WP_011017334.1 ABC transporter permease Regulator
  ETT68_RS01455 (ETT68_01455) amiD 267584..268510 (+) 927 WP_002986004.1 oligopeptide ABC transporter permease OppC Regulator
  ETT68_RS01460 (ETT68_01460) amiE 268519..269589 (+) 1071 WP_136275660.1 ABC transporter ATP-binding protein Regulator
  ETT68_RS01465 (ETT68_01465) amiF 269582..270505 (+) 924 WP_002986000.1 ABC transporter ATP-binding protein Regulator
  ETT68_RS09405 (ETT68_01470) - 270543..270632 (-) 90 WP_109821088.1 IS3 family transposase -
  ETT68_RS09040 - 270653..270898 (-) 246 WP_175393721.1 transposase -

Sequence

Protein


Download         Length: 356 a.a.        Molecular weight: 39652.68 Da        Isoelectric Point: 5.4774

>NTDB_id=341210 ETT68_RS01460 WP_136275660.1 268519..269589(+) (amiE) [Streptococcus pyogenes strain emm105]
MTKENNVILTAKDVVVEFDVRDRVLTAIRNVSLELVEGEVLAFVGESGSGKSVLTKTFTGMLESNGRIANGSIAYRGQEL
TDLKTNKEWAKIRGSKIATIFQDPMTSLSPIKTIGSQITEVIIKHQKVSNAKAKEMALDYMNKVGIPNAKKRFEDYPFEY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIVELLKSLQREYHFTIIFITHDLGVVASIADKVAVMYAGEIVE
FGTVEEIFYDPRHPYTWSLLSSLPQLADESGELYAIPGTPPSLYSPIIGDAFALRSEYAMVLDFEKAPPAINVSETHWAK
TWLLHPEAPKVQKPEVIQDLHQKILRKMSQQEEGNV

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=341210 ETT68_RS01460 WP_136275660.1 268519..269589(+) (amiE) [Streptococcus pyogenes strain emm105]
ATGACAAAAGAAAATAATGTAATCTTAACTGCCAAAGATGTGGTGGTAGAATTTGATGTGCGTGATCGTGTTTTAACAGC
TATCCGTAACGTCTCACTGGAACTTGTTGAAGGAGAAGTCCTTGCTTTTGTAGGGGAATCAGGCTCAGGTAAATCTGTTT
TAACAAAGACCTTTACAGGGATGTTGGAGTCTAATGGACGCATTGCTAATGGTTCAATTGCCTATCGTGGGCAAGAATTG
ACAGATTTAAAAACAAATAAAGAGTGGGCAAAGATTCGCGGCTCAAAAATCGCAACGATTTTCCAAGACCCAATGACCAG
TCTTAGTCCCATTAAAACTATCGGTAGCCAAATCACAGAAGTGATTATTAAGCACCAAAAAGTAAGTAATGCCAAAGCTA
AAGAAATGGCCCTTGATTACATGAATAAAGTGGGTATCCCAAATGCCAAAAAACGCTTTGAAGATTACCCATTTGAGTAT
TCAGGAGGAATGCGTCAACGTATTGTTATCGCTATTGCTTTAGCTTGTCGCCCAGATATTCTTATCTGTGATGAGCCAAC
AACAGCCCTTGATGTGACTATTCAAGCTCAAATCGTTGAGTTATTGAAGTCGCTTCAACGAGAATATCATTTCACCATTA
TCTTTATTACGCACGATTTAGGTGTTGTGGCAAGCATTGCAGATAAAGTGGCTGTCATGTATGCAGGAGAAATTGTTGAA
TTTGGAACAGTCGAAGAGATTTTCTATGATCCAAGACACCCCTATACATGGAGTTTGCTGTCTAGCTTACCGCAGTTGGC
AGATGAATCTGGTGAACTTTACGCTATTCCAGGAACGCCTCCATCACTTTATTCACCAATTATCGGAGATGCCTTTGCAC
TTCGCTCAGAATATGCTATGGTTTTAGACTTTGAAAAAGCACCTCCGGCGATTAACGTATCTGAGACTCATTGGGCCAAA
ACATGGCTTTTACACCCAGAGGCTCCAAAAGTTCAAAAACCAGAAGTCATTCAAGATTTGCATCAAAAAATCTTAAGGAA
AATGTCACAACAGGAGGAAGGAAATGTCTGA

Domains

Predicted by InterproScan.

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(239-299)

ABC transporter (ABC_tran)

(29-187)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

76.667

100

0.775
  amiE Streptococcus thermophilus LMG 18311

75.556

100

0.764
  amiE Streptococcus thermophilus LMD-9

75.556

100

0.764
  oppD Streptococcus mutans UA159

56.677

94.663

0.537

Multiple sequence alignment