Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   SGPB_RS08000 Genome accession   NC_015600
Coordinates   1626144..1626944 (-) Length   266 a.a.
NCBI ID   WP_013852168.1    Uniprot ID   F5X2S8
Organism   Streptococcus pasteurianus ATCC 43144     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1621144..1631944
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGPB_RS07975 (SGPB_1557) - 1621973..1622602 (+) 630 WP_003065995.1 copper homeostasis protein CutC -
  SGPB_RS07980 (SGPB_1558) - 1622924..1623265 (-) 342 WP_003066000.1 P-II family nitrogen regulator -
  SGPB_RS07985 (SGPB_1559) - 1623322..1624557 (-) 1236 WP_003066002.1 ammonium transporter -
  SGPB_RS07990 (SGPB_1560) rsmI 1624958..1625824 (-) 867 WP_003066004.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  SGPB_RS07995 (SGPB_1561) yabA 1625831..1626151 (-) 321 WP_003066006.1 DNA replication initiation control protein YabA -
  SGPB_RS08000 (SGPB_1562) yaaT 1626144..1626944 (-) 801 WP_013852168.1 PSP1 domain-containing protein Regulator
  SGPB_RS08005 (SGPB_1563) - 1626941..1627816 (-) 876 WP_003066011.1 DNA polymerase III subunit delta' -
  SGPB_RS08010 (SGPB_1564) tmk 1627827..1628462 (-) 636 WP_003066013.1 dTMP kinase -
  SGPB_RS08015 (SGPB_1565) - 1628651..1629310 (-) 660 WP_013852169.1 CBS domain-containing protein -
  SGPB_RS08020 (SGPB_1566) - 1629484..1630194 (-) 711 WP_003066018.1 ABC transporter ATP-binding protein -
  SGPB_RS08025 (SGPB_1567) - 1630194..1630958 (-) 765 WP_003066020.1 ABC transporter ATP-binding protein -
  SGPB_RS08030 (SGPB_1568) - 1630958..1631911 (-) 954 WP_003066023.1 branched-chain amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29812.61 Da        Isoelectric Point: 7.8117

>NTDB_id=34121 SGPB_RS08000 WP_013852168.1 1626144..1626944(-) (yaaT) [Streptococcus pasteurianus ATCC 43144]
MTEVLSVKYEETGSIVYVLPNKKYKLGDYVVVKNKKGCRLAQVVTSNEVIDEVKLPAEMDSVTRLANEKDKQVYQENIDL
AKRSFSTVNELILANDLKMKVIDIIFPLERSCVLITFSAEERVDFRQLLRDLAGHFKTRIELRQINSREEAKVYGGLGPC
GRALCCSSFLGEFPPVSIKMVKNQGMSLSTGKTSGICGRLMCCLSFEDDFYKASKRKFPDVGTEIETVDGLGVIAGIDVF
SDTVKVRFPEKHTLLTYALEEVKVRG

Nucleotide


Download         Length: 801 bp        

>NTDB_id=34121 SGPB_RS08000 WP_013852168.1 1626144..1626944(-) (yaaT) [Streptococcus pasteurianus ATCC 43144]
ATGACAGAAGTATTGAGCGTAAAATACGAAGAAACAGGCAGTATTGTCTATGTTTTACCAAATAAAAAATATAAACTCGG
CGATTACGTCGTCGTCAAAAATAAAAAAGGGTGTCGTTTGGCGCAAGTTGTCACTAGCAACGAAGTCATTGATGAGGTCA
AATTACCTGCTGAGATGGATTCTGTAACACGTCTTGCCAATGAAAAAGATAAACAAGTTTACCAAGAAAATATTGATTTA
GCGAAGCGTTCGTTTTCAACGGTTAATGAGCTAATTTTAGCTAATGACCTAAAAATGAAAGTGATTGATATTATTTTCCC
TTTGGAAAGAAGCTGTGTGCTTATCACGTTTTCAGCAGAAGAACGTGTTGATTTTCGTCAATTGCTACGTGATTTAGCAG
GTCATTTCAAAACAAGAATCGAACTTCGTCAAATCAACAGCCGCGAAGAAGCTAAGGTTTATGGTGGTCTTGGACCGTGT
GGTCGTGCCCTTTGTTGTTCAAGTTTTTTGGGAGAATTTCCACCTGTGTCTATTAAAATGGTCAAAAATCAAGGAATGTC
ACTCAGCACAGGAAAAACATCAGGTATCTGTGGGCGTTTGATGTGTTGTTTGAGTTTTGAAGATGACTTTTATAAAGCCT
CTAAGAGGAAATTCCCTGATGTAGGAACGGAGATTGAAACAGTTGATGGCTTGGGAGTTATTGCAGGGATTGATGTGTTT
TCTGATACCGTCAAAGTTCGTTTTCCAGAAAAACACACGCTCTTAACCTATGCTTTAGAGGAGGTCAAAGTACGTGGATA
A

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F5X2S8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

41.199

100

0.414

Multiple sequence alignment