Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT69_RS09175 Genome accession   NZ_CP035430
Coordinates   1802139..1802852 (+) Length   237 a.a.
NCBI ID   WP_136019163.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm55     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1797139..1807852
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT69_RS09165 (ETT69_09155) treC 1798209..1799837 (-) 1629 WP_136019161.1 alpha,alpha-phosphotrehalase -
  ETT69_RS09170 (ETT69_09160) treP 1799904..1801928 (-) 2025 WP_136019162.1 PTS system trehalose-specific EIIBC component -
  ETT69_RS09175 (ETT69_09165) treR 1802139..1802852 (+) 714 WP_136019163.1 trehalose operon repressor Regulator
  ETT69_RS09185 (ETT69_09175) - 1803131..1803469 (-) 339 Protein_1716 winged helix-turn-helix transcriptional regulator -
  ETT69_RS09190 (ETT69_09180) - 1803655..1804512 (+) 858 WP_136019165.1 VOC family protein -
  ETT69_RS09195 (ETT69_09185) yaaA 1804554..1805285 (+) 732 WP_011055084.1 peroxide stress protein YaaA -
  ETT69_RS09200 (ETT69_09190) nrdG 1805459..1806073 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT69_RS09205 (ETT69_09195) - 1806088..1806582 (-) 495 WP_014407930.1 GNAT family N-acetyltransferase -
  ETT69_RS09210 (ETT69_09200) - 1806591..1807526 (-) 936 WP_009880789.1 Gfo/Idh/MocA family protein -
  ETT69_RS09790 - 1807555..1807701 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27650.82 Da        Isoelectric Point: 9.6307

>NTDB_id=341189 ETT69_RS09175 WP_136019163.1 1802139..1802852(+) (treR) [Streptococcus pyogenes strain emm55]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLTIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=341189 ETT69_RS09175 WP_136019163.1 1802139..1802852(+) (treR) [Streptococcus pyogenes strain emm55]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GACTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCACCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675

Multiple sequence alignment