Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ETT69_RS02575 Genome accession   NZ_CP035430
Coordinates   466098..466907 (+) Length   269 a.a.
NCBI ID   WP_023610429.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm55     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 461098..471907
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT69_RS02555 (ETT69_02550) - 461540..462787 (+) 1248 WP_136019261.1 AMP-binding protein -
  ETT69_RS02560 (ETT69_02555) - 462843..463877 (+) 1035 WP_175384541.1 DUF3114 domain-containing protein -
  ETT69_RS02565 (ETT69_02560) vicR 464039..464749 (+) 711 WP_002985645.1 response regulator YycF Regulator
  ETT69_RS02570 (ETT69_02565) vicK 464742..466094 (+) 1353 WP_002995609.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ETT69_RS02575 (ETT69_02570) vicX 466098..466907 (+) 810 WP_023610429.1 MBL fold metallo-hydrolase Regulator
  ETT69_RS02580 (ETT69_02575) rnc 467350..468042 (+) 693 WP_136019263.1 ribonuclease III -
  ETT69_RS02585 (ETT69_02580) smc 468043..471582 (+) 3540 WP_136019264.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30055.14 Da        Isoelectric Point: 5.7156

>NTDB_id=341165 ETT69_RS02575 WP_023610429.1 466098..466907(+) (vicX) [Streptococcus pyogenes strain emm55]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGHNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=341165 ETT69_RS02575 WP_023610429.1 466098..466907(+) (vicX) [Streptococcus pyogenes strain emm55]
ATGAATGAGAGTGGTTTTAAATACAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
GTCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGC
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762

Multiple sequence alignment