Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT70_RS08680 Genome accession   NZ_CP035429
Coordinates   1691288..1692001 (+) Length   237 a.a.
NCBI ID   WP_136112432.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emmNA     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1686288..1697001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT70_RS08670 (ETT70_08660) treC 1687358..1688986 (-) 1629 WP_136097890.1 alpha,alpha-phosphotrehalase -
  ETT70_RS08675 (ETT70_08665) treP 1689053..1691077 (-) 2025 WP_136275897.1 PTS system trehalose-specific EIIBC component -
  ETT70_RS08680 (ETT70_08670) treR 1691288..1692001 (+) 714 WP_136112432.1 trehalose operon repressor Regulator
  ETT70_RS08690 (ETT70_08680) - 1692281..1692619 (-) 339 Protein_1609 winged helix-turn-helix transcriptional regulator -
  ETT70_RS08695 (ETT70_08685) - 1692805..1693652 (+) 848 Protein_1610 VOC family protein -
  ETT70_RS08700 (ETT70_08690) yaaA 1693694..1694425 (+) 732 WP_136275898.1 peroxide stress protein YaaA -
  ETT70_RS08705 (ETT70_08695) nrdG 1694599..1695213 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT70_RS08710 (ETT70_08700) - 1695228..1695722 (-) 495 WP_136275899.1 GNAT family N-acetyltransferase -
  ETT70_RS08715 (ETT70_08705) - 1695731..1696666 (-) 936 WP_136106359.1 Gfo/Idh/MocA family protein -
  ETT70_RS09270 - 1696695..1696841 (-) 147 WP_011106921.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27639.84 Da        Isoelectric Point: 9.7513

>NTDB_id=341134 ETT70_RS08680 WP_136112432.1 1691288..1692001(+) (treR) [Streptococcus pyogenes strain emmNA]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQRVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=341134 ETT70_RS08680 WP_136112432.1 1691288..1692001(+) (treR) [Streptococcus pyogenes strain emmNA]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACGTGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(91-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

67.949

98.734

0.671

Multiple sequence alignment