Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ETT70_RS07160 Genome accession   NZ_CP035429
Coordinates   1370211..1370936 (-) Length   241 a.a.
NCBI ID   WP_136275920.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emmNA     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1365211..1375936
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT70_RS07125 (ETT70_07115) rnpM 1365245..1365541 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  ETT70_RS07130 (ETT70_07120) nusA 1365557..1366714 (-) 1158 WP_002994325.1 transcription termination factor NusA -
  ETT70_RS07135 (ETT70_07125) rimP 1366889..1367425 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT70_RS07145 (ETT70_07135) trmB 1367684..1368319 (-) 636 WP_011184863.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT70_RS07150 (ETT70_07140) ccrZ 1368319..1369110 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT70_RS07155 (ETT70_07145) - 1369174..1370208 (-) 1035 WP_136275919.1 ABC transporter permease -
  ETT70_RS07160 (ETT70_07150) pptA 1370211..1370936 (-) 726 WP_136275920.1 ABC transporter ATP-binding protein Regulator
  ETT70_RS07165 (ETT70_07155) - 1371008..1371427 (+) 420 WP_002983376.1 HIT family protein -
  ETT70_RS07170 (ETT70_07160) - 1371424..1371780 (+) 357 WP_136117622.1 chemotaxis protein -
  ETT70_RS07175 (ETT70_07165) - 1371891..1373165 (-) 1275 WP_136105533.1 biofilm formation/cell division transcriptional regulator BrpA -
  ETT70_RS07180 (ETT70_07170) - 1373174..1373698 (-) 525 WP_111704937.1 GNAT family N-acetyltransferase -
  ETT70_RS07185 (ETT70_07175) tsaE 1373673..1374134 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ETT70_RS07190 (ETT70_07180) - 1374288..1375748 (-) 1461 WP_012560892.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26738.84 Da        Isoelectric Point: 4.5624

>NTDB_id=341128 ETT70_RS07160 WP_136275920.1 1370211..1370936(-) (pptA) [Streptococcus pyogenes strain emmNA]
MLNIKNLTGGYHNIPVLNDVSFFVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=341128 ETT70_RS07160 WP_136275920.1 1370211..1370936(-) (pptA) [Streptococcus pyogenes strain emmNA]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTTTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment