Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ETT70_RS06340 Genome accession   NZ_CP035429
Coordinates   1207567..1208604 (-) Length   345 a.a.
NCBI ID   WP_010922499.1    Uniprot ID   A0A4U9I5V9
Organism   Streptococcus pyogenes strain emmNA     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1202567..1213604
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT70_RS06320 (ETT70_06310) - 1203317..1203943 (+) 627 WP_136275962.1 A24 family peptidase -
  ETT70_RS06325 (ETT70_06315) rlmN 1204025..1205104 (-) 1080 WP_111680790.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ETT70_RS06330 (ETT70_06320) - 1205108..1205728 (-) 621 WP_002992791.1 YutD family protein -
  ETT70_RS06335 (ETT70_06325) - 1206176..1207153 (-) 978 WP_002994809.1 LacI family DNA-binding transcriptional regulator -
  ETT70_RS06340 (ETT70_06330) sepM 1207567..1208604 (-) 1038 WP_010922499.1 SepM family pheromone-processing serine protease Regulator
  ETT70_RS06345 (ETT70_06335) coaD 1208591..1209082 (-) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  ETT70_RS06350 (ETT70_06340) rsmD 1209072..1209611 (-) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ETT70_RS06355 (ETT70_06345) asnA 1209734..1210726 (-) 993 WP_023611792.1 aspartate--ammonia ligase -
  ETT70_RS06360 (ETT70_06350) arcC 1211039..1211989 (-) 951 WP_109828594.1 carbamate kinase -
  ETT70_RS06365 (ETT70_06355) - 1212009..1213340 (-) 1332 WP_136275963.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37541.24 Da        Isoelectric Point: 9.6692

>NTDB_id=341123 ETT70_RS06340 WP_010922499.1 1207567..1208604(-) (sepM) [Streptococcus pyogenes strain emmNA]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=341123 ETT70_RS06340 WP_010922499.1 1207567..1208604(-) (sepM) [Streptococcus pyogenes strain emmNA]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCTCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGCTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9I5V9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.275

100

0.693


Multiple sequence alignment