Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   ETT70_RS01375 Genome accession   NZ_CP035429
Coordinates   251991..253061 (+) Length   356 a.a.
NCBI ID   WP_010921893.1    Uniprot ID   A0A4U9C068
Organism   Streptococcus pyogenes strain emmNA     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 246991..258061
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT70_RS01360 (ETT70_01360) amiA 247519..249489 (+) 1971 WP_136275950.1 peptide ABC transporter substrate-binding protein Regulator
  ETT70_RS01365 (ETT70_01365) amiC 249554..251056 (+) 1503 WP_002991105.1 ABC transporter permease Regulator
  ETT70_RS01370 (ETT70_01370) amiD 251056..251982 (+) 927 WP_002986004.1 oligopeptide ABC transporter permease OppC Regulator
  ETT70_RS01375 (ETT70_01375) amiE 251991..253061 (+) 1071 WP_010921893.1 ABC transporter ATP-binding protein Regulator
  ETT70_RS01380 (ETT70_01380) amiF 253054..253977 (+) 924 WP_002986000.1 ABC transporter ATP-binding protein Regulator
  ETT70_RS09530 (ETT70_01385) - 254015..254098 (-) 84 Protein_223 IS3 family transposase -
  ETT70_RS09320 - 254233..254557 (-) 325 Protein_224 IS3 family transposase -

Sequence


Protein


Download         Length: 356 a.a.        Molecular weight: 39703.77 Da        Isoelectric Point: 5.6707

>NTDB_id=341100 ETT70_RS01375 WP_010921893.1 251991..253061(+) (amiE) [Streptococcus pyogenes strain emmNA]
MTKENNVILTAKDVVVEFDVRDRVLTAIRNVSLELVEGEVLAFVGESGSGKSVLTKTFTGMLESNGRIANGSIVYRGQEL
TDLKTNKEWAKIRGSKIATIFQDPMTSLSPIKTIGSQITEVIIKHQKVSHAKAKEMALDYMNKVGIPNAKKRFEDYPFEY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIVELLKSLQREYHFTIIFITHDLGVVASIADKVAVMYAGEIVE
FGTVEEIFYDPRHPYTWSLLSSLPQLADESGELYAIPGTPPSLYSPIIGDAFALRSEYAMVLDFEKAPPAINVSETHWAK
TWLLHPEAPKVQKPEVIQDLHQKILRKMSQQEEGNV

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=341100 ETT70_RS01375 WP_010921893.1 251991..253061(+) (amiE) [Streptococcus pyogenes strain emmNA]
ATGACAAAAGAAAATAATGTAATCTTAACTGCCAAAGATGTGGTGGTAGAATTTGATGTGCGTGATCGTGTTTTAACAGC
TATCCGTAACGTCTCACTGGAACTTGTTGAAGGAGAAGTCCTTGCTTTTGTAGGGGAATCAGGCTCAGGTAAATCTGTTT
TAACAAAGACCTTTACAGGGATGTTGGAGTCTAATGGACGCATTGCTAATGGTTCAATTGTCTATCGTGGGCAAGAATTG
ACAGATTTAAAAACAAATAAAGAGTGGGCAAAGATTCGCGGCTCAAAAATCGCAACGATTTTCCAAGACCCAATGACCAG
TCTTAGTCCCATTAAAACTATCGGTAGCCAAATCACAGAAGTGATTATTAAGCACCAAAAAGTAAGTCATGCCAAAGCTA
AAGAAATGGCCCTTGATTACATGAATAAAGTGGGTATCCCAAATGCCAAAAAACGCTTTGAAGATTACCCATTTGAGTAT
TCAGGAGGAATGCGTCAACGTATTGTTATCGCTATTGCTTTAGCTTGTCGCCCAGATATTCTTATCTGTGATGAGCCAAC
AACAGCCCTTGATGTGACTATTCAAGCTCAAATCGTTGAGTTATTGAAGTCGCTTCAACGAGAATATCATTTCACCATTA
TCTTTATTACGCACGATTTAGGTGTTGTGGCAAGCATTGCAGATAAAGTGGCTGTCATGTATGCAGGAGAAATTGTTGAA
TTTGGAACAGTCGAAGAGATTTTCTATGATCCAAGACACCCCTATACATGGAGTTTGCTGTCTAGCTTACCGCAGTTGGC
AGATGAATCTGGTGAACTTTACGCTATTCCAGGAACGCCTCCATCACTTTATTCACCAATTATCGGAGATGCCTTTGCAC
TTCGCTCAGAATATGCTATGGTTTTAGACTTTGAAAAAGCACCTCCGGCGATTAACGTATCTGAGACTCATTGGGCCAAA
ACATGGCTTTTACACCCAGAGGCTCCAAAAGTTCAAAAACCAGAAGTCATTCAAGATTTGCATCAAAAAATCTTAAGGAA
AATGTCACAACAGGAGGAAGGAAATGTCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9C068

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

76.667

100

0.775

  amiE Streptococcus thermophilus LMG 18311

75.556

100

0.764

  amiE Streptococcus thermophilus LMD-9

75.556

100

0.764

  oppD Streptococcus mutans UA159

56.677

94.663

0.537


Multiple sequence alignment